CIRCexplorer3: A CLEAR Pipeline for Direct Comparison of Circular and Linear RNA Expression. - Xu-Kai Ma; Meng-Ran Wang; Chu-Xiao Liu; Rui Dong 003; Gordon G. Carmichael; Ling-Ling Chen; Li Yang (Genom. Proteom. Bioinform., 2019)

Annotating TSSs in Multiple Cell Types Based on DNA Sequence and RNA-seq Data via DeeReCT-TSS. - Juexiao Zhou; Bin Zhang 042; Haoyang Li; Longxi Zhou; Zhongxiao Li; Yongkang Long; Wenkai Han; Meng-Ran Wang; Huanhuan Cui; Jingjing Li; Wei Chen 029; Xin Gao 001 (Genom. Proteom. Bioinform., 2022)