Drug Target Prediction by Multi-View Low Rank Embedding. - Limin Li; Menglan Cai (IEEE ACM Trans. Comput. Biol. Bioinform., 2019)

MicroRNA-disease association prediction by matrix tri-factorization. - Huiran Li; Yin Guo; Menglan Cai; Limin Li (BMC Genom., 2020)

XGSEA: CROSS-species gene set enrichment analysis via domain adaptation. - Menglan Cai; Canh Hao Nguyen; Hiroshi Mamitsuka; Limin Li (Briefings Bioinform., 2021)

Cross-species Data Classification by Domain Adaptation via Discriminative Heterogeneous Maximum Mean Discrepancy. - Limin Li; Menglan Cai (IEEE ACM Trans. Comput. Biol. Bioinform., 2021)

NetTDP: permutation-based true discovery proportions for differential co-expression network analysis. - Menglan Cai; Anna Vesely; Xu Chen; Limin Li; Jelle J. Goeman (Briefings Bioinform., 2022)