Cyclical regulation of the insulin-like growth factor binding protein 3 gene in response to 1α, 25-dihydroxyvitamin D3. - Marjo Malinen; Jussi Ryynänen; Merja Heinäniemi; Sami Väisänen; Carsten Carlberg (Nucleic Acids Res., 2011)

Semisupervised Generative Autoencoder for Single-Cell Data. - Trung Ngo Trong; Juha Mehtonen; Gerardo González; Roger Kramer; Ville Hautamäki; Merja Heinäniemi (J. Comput. Biol., 2020)

The Transitive Information Theory and its Application to Deep Generative Models. - Trung Ngo Trong; Najwa Laabid; Ville Hautamäki; Merja Heinäniemi (CoRR, 2022)

ECCB2024: The 23rd European Conference on Computational Biology. - Anu Kukkonen-Macchi; Sampsa Hautaniemi; Katharina F. Heil; Merja Heinäniemi; Lars Juhl Jensen; Sini Junttila; Lukas Käll; Asta Laiho; Peter Maccallum; Matti Nykter; Bengt Persson; Tomi Suomi; et al. (Bioinform., 2024)