Deep Learning Models Based on Distributed Feature Representations for Alternative Splicing Prediction. - Mhaned Oubounyt; Zakaria Louadi; Hilal Tayara; Kil To Chong 001 (IEEE Access, 2018)

Enabling single-cell trajectory network enrichment. - Alexander G. B. Grønning; Mhaned Oubounyt; Kristiyan Kanev; Jesper Lund; Tim Kacprowski; Dietmar Zehn; Richard Röttger; Jan Baumbach (Nat. Comput. Sci., 2021)

Computational Methods for Single-Cell Network Biology Analysis - Mhaned Oubounyt (2023)

Inference of differential key regulatory networks and mechanistic drug repurposing candidates from scRNA-seq data with SCANet. - Mhaned Oubounyt; Lorenz Adlung; Fábio Malta de Sá Patroni; Nina Kerstin Wenke; Andreas Maier 009; Michael Hartung; Jan Baumbach; Maria L. Elkjaer (Bioinform., 2023)

DRaCOon: a novel algorithm for pathway-level differential co-expression analysis in transcriptomics. - Fernando M. Delgado-Chaves; Ferdinand Spurny; Tanja Laske; Mhaned Oubounyt; Jan Baumbach (BMC Bioinform., 2025)