GARD: a genetic algorithm for recombination detection. - Sergei L. Kosakovsky Pond; David Posada; Michael B. Gravenor; Christopher H. Woelk; Simon D. W. Frost (Bioinform., 2006)

Adaptation to Different Human Populations by HIV-1 Revealed by Codon-Based Analyses. - Sergei L. Kosakovsky Pond; Simon D. W. Frost; Zehava Grossman; Michael B. Gravenor; Douglas D. Richman; Andrew J. Leigh Brown (PLoS Comput. Biol., 2006)

An Evolutionary Model-Based Algorithm for Accurate Phylogenetic Breakpoint Mapping and Subtype Prediction in HIV-1. - Sergei L. Kosakovsky Pond; David Posada; Eric W. Stawiski; Colombe Chappey; Art F. Y. Poon; Gareth Hughes; Esther Fearnhill; Mike B. Gravenor; Andrew J. Leigh Brown; Simon D. W. Frost (PLoS Comput. Biol., 2009)

Construction of parsimonious Takagi-Sugeno fuzzy rule based model in characterising impacts of child health, socioeconomic deprivations on educational outcomes. - Shang-Ming Zhou; Ronan A. Lyons; Mike B. Gravenor (FUZZ-IEEE, 2010)

CodonTest: Modeling Amino Acid Substitution Preferences in Coding Sequences. - Wayne Delport; Konrad Scheffler; Gordon Botha; Mike B. Gravenor; Spencer V. Muse; Sergei L. Kosakovsky Pond (PLoS Comput. Biol., 2010)