Gap statistics for whole genome shotgun DNA sequencing projects. - Michael C. Wendl; Shiaw-Pyng Yang (Bioinform., 2004)

Extension of Lander-Waterman theory for sequencing filtered DNA libraries. - Michael C. Wendl; William Bradley Barbazuk (BMC Bioinform., 2005)

Probabilistic Assessment of Clone Overlaps in DNA Fingerprint Mapping via a Priori Models. - Michael C. Wendl (J. Comput. Biol., 2005)

A General Coverage Theory for Shotgun DNA Sequencing. - Michael C. Wendl (J. Comput. Biol., 2006)

Algebraic correction methods for computational assessment of clone overlaps in DNA fingerprint mapping. - Michael C. Wendl (BMC Bioinform., 2007)

Design and implementation of a generalized laboratory data model. - Michael C. Wendl; Scott M. Smith; Craig S. Pohl; David J. Dooling; Asif T. Chinwalla; Kevin Crouse; Todd G. Hepler; Shin Leong; Lynn K. Carmichael; Mike Nhan; Benjamin J. Oberkfell; Elaine R. Mardis; et al. (BMC Bioinform., 2007)

Aspects of coverage in medical DNA sequencing. - Michael C. Wendl; Richard K. Wilson (BMC Bioinform., 2008)

Random Covering of Multiple One-Dimensional Domains with an Application to DNA Sequencing. - Michael C. Wendl (SIAM J. Appl. Math., 2008)

PathScan: a tool for discerning mutational significance in groups of putative cancer genes. - Michael C. Wendl; John W. Wallis; Ling Lin; Cyriac Kandoth; Elaine R. Mardis; Richard K. Wilson; Li Ding (Bioinform., 2011)

MSIsensor: microsatellite instability detection using paired tumor-normal sequence data. - Beifang Niu; Kai Ye 001; Qunyuan Zhang; Charles Lu 002; Mingchao Xie; Michael D. McLellan; Michael C. Wendl; Li Ding (Bioinform., 2014)

BreakPoint Surveyor: a pipeline for structural variant visualization. - Matthew A. Wyczalkowski; Kristine M. Wylie; Song Cao; Michael D. McLellan; Jennifer Flynn; Mo Huang; Kai Ye 001; Xian Fan; Ken Chen 001; Michael C. Wendl; Li Ding (Bioinform., 2017)

AeQTL: eQTL analysis using region-based aggregation of rare genomic variants. - Guanlan Dong; Michael C. Wendl; Bin Zhang; Li Ding; Kuan-Lin Huang (PSB, 2021)

MSIsensor-ct: microsatellite instability detection using cfDNA sequencing data. - Xinyin Han; Shuying Zhang; Daniel Cui Zhou; Dongliang Wang; Xiaoyu He; Danyang Yuan; Ruilin Li; Jiayin He; Xiaohong Duan; Michael C. Wendl; Li Ding; Beifang Niu (Briefings Bioinform., 2021)