The effect of task conditions on the comprehensibility of synthetic speech. - Jennifer Lai; David Wood; Michael Considine (CHI, 2000)

Outlier Gene Set Analysis Combined with Top Scoring Pair Provides Robust Biomarkers of Pathway Activity. - Michael F. Ochs; Jason E. Farrar; Michael Considine; Yingying Wei; Soheil Meschinchi; Robert J. Arceci (PRIB, 2013)

Preserving biological heterogeneity with a permuted surrogate variable analysis for genomics batch correction. - Hilary S. Parker; Jeffrey T. Leek; Alexander V. Favorov; Michael Considine; Xiaoxin Xia; Sameer Chavan; Christine H. Chung; Elana J. Fertig (Bioinform., 2014)

Outlier Analysis and Top Scoring Pairfor Integrated Data Analysisand Biomarker Discovery. - Michael F. Ochs; Jason E. Farrar; Michael Considine; Yingying Wei; Soheil Meshinchi; Robert J. Arceci (IEEE ACM Trans. Comput. Biol. Bioinform., 2014)

AGA: Interactive pipeline for reproducible genomics analyses. - Michael Considine; Hilary S. Parker; Yingying Wei; Xaio Xia; Leslie Cope; Michael F. Ochs; Elana J. Fertig (F1000Research, 2015)

PatternMarkers & GWCoGAPS for novel data-driven biomarkers via whole transcriptome NMF. - Genevieve L. Stein-O'Brien; Jacob L. Carey; Waishing Lee; Michael Considine; Alexander V. Favorov; Emily Flam; Theresa Guo; Sijia Li; Luigi Marchionni; Thomas Sherman; Shawn Sivy; Daria A. Gaykalova; et al. (Bioinform., 2017)

Splice Expression Variation Analysis (SEVA) for inter-tumor heterogeneity of gene isoform usage in cancer. - Bahman Afsari; Theresa Guo; Michael Considine; Liliana Florea; Luciane T. Kagohara; Genevieve L. Stein-O'Brien; Dylan Kelley; Emily Flam; Kristina D. Zambo; Patrick K. Ha; Donald Geman; Michael F. Ochs; et al. (Bioinform., 2018)

CancerInSilico: An R/Bioconductor package for combining mathematical and statistical modeling to simulate time course bulk and single cell gene expression data in cancer. - Thomas Sherman; Luciane T. Kagohara; Raymon Cao; Raymond Cheng; Matthew Satriano; Michael Considine; Gabriel Krigsfeld; Ruchira Ranaweera; Yong Tang; Sandra A. Jablonski; Genevieve L. Stein-O'Brien; Daria A. Gaykalova; et al. (PLoS Comput. Biol., 2019)