bammds: a tool for assessing the ancestry of low-depth whole-genome data using multidimensional scaling (MDS). - Anna-Sapfo Malaspinas; Ole Tange; José Víctor Moreno-Mayar; Morten Rasmussen; Michael Degiorgio; Yong Wang; Cristina E. Valdiosera; Gustavo Politis; Eske Willerslev; Rasmus Nielsen (Bioinform., 2014)

Computational and Statistical Analyses of Insertional Polymorphic Endogenous Retroviruses in a Non-Model Organism. - Le Bao; Daniel Elleder; Raunaq Malhotra; Michael Degiorgio; Theodora Maravegias; Lindsay Horvath; Laura Carrel; Colin Gillin; Tomás Hron; Helena Fábryová; David R. Hunter; Mary Poss (Comput., 2014)

SweepFinder2: increased sensitivity, robustness and flexibility. - Michael Degiorgio; Christian D. Huber; Melissa J. Hubisz; Ines Hellmann; Rasmus Nielsen (Bioinform., 2016)

PhyloWGA: chromosome-aware phylogenetic interrogation of whole genome alignments. - Richard H. Adams; Todd A. Castoe; Michael Degiorgio (Bioinform., 2021)

BalLeRMix +: mixture model approaches for robust joint identification of both positive selection and long-term balancing selection. - Xiaoheng Cheng; Michael Degiorgio (Bioinform., 2022)