Archiving the Semantics of Digital Engineering Artifacts in CIBER-U. - William C. Regli; Michael Grauer; Joseph Kopena; David Wilkie; Martin Piecyk; Jordan Osecki (IAAI, 2009)

A framework for preservable geometry-centric artifacts. - William C. Regli; Michael Grauer; Joseph B. Kopena (Symposium on Solid and Physical Modeling, 2009)

Semantics for Digital Engineering Archives Supporting Engineering Design Education. - William C. Regli; Joseph B. Kopena; Michael Grauer; Timothy W. Simpson; Robert B. Stone; Kemper Lewis; Matt R. Bohm; David Wilkie; Martin Piecyk; Jordan Osecki (AI Mag., 2010)

Mitochondrial Genome Sequence Analysis: A custom bioinformatics pipeline substantially improves Affymetrix MitoChip v2.0 call rate and accuracy. - Hongbo M. Xie; Juan C. Perin; Theodore G. Schurr; Matthew C. Dulik; Sergey I. Zhadanov; Joseph A. Baur; Michael P. King; Emily Place; Colleen Clarke; Michael Grauer; Jonathan Schug; Avni Santani; et al. (BMC Bioinform., 2011)

On the long-term retention of geometry-centric digital engineering artifacts. - William C. Regli; Joseph B. Kopena; Michael Grauer (Comput. Aided Des., 2011)

Fully automated rodent brain MR image processing pipeline on a Midas server: from acquired images to region-based statistics. - François Budin; Marion Hoogstoel; Patrick Reynolds; Michael Grauer; Shonagh K. O'Leary-Moore; Ipek Oguz (Frontiers Neuroinformatics, 2013)

A midas plugin to enable construction of reproducible web-based image processing pipelines. - Michael Grauer; Patrick Reynolds; Marion Hoogstoel; François Budin; Martin Andreas Styner; Ipek Oguz (Frontiers Neuroinformatics, 2013)

Dynamic Provisioning and Execution of HPC Workflows Using Python. - Chris Harris 004; Patrick O'Leary; Michael Grauer; Aashish Chaudhary; Chris Kotfila; Robert M. O'Bara (PyHPC@SC, 2016)

A modular computational framework for medical digital twins. - Joseph Masison; Jonathan Beezley; Yu Mei; Henrique Assis Lopes Ribeiro; Adam C. Knapp; Luis Sordo Vieira; Bandita Adhikari; Yogesh Scindia; Michael Grauer; Brian Helba; William Schroeder; Borna Mehrad; et al. (Proc. Natl. Acad. Sci. USA, 2021)