Creating Bioinformatic Workflows within the BioExtract Server. - Carol Lushbough; Michael K. Bergman; Carolyn J. Lawrence; Douglas M. Jennewein; Volker Brendel (BIOCOMP, 2007)

Structure Paves the Way to the Semantic Web. - Michael K. Bergman (IEEE Intell. Syst., 2007)

zLinks: Semantic Framework for Invoking Contextual Linked Data. - Michael K. Bergman; Frederick Giasson (LDOW, 2008)

Implementing bioinformatic workflows within the BioExtract Server. - Carol Lushbough; Michael K. Bergman; Carolyn J. Lawrence; Douglas M. Jennewein; Volker Brendel (Int. J. Comput. Biol. Drug Des., 2008)

BioExtract Server - An Integrated Workflow-Enabling System to Access and Analyze Heterogeneous, Distributed Biomolecular Data. - Carol Lushbough; Michael K. Bergman; Carolyn J. Lawrence; Douglas M. Jennewein; Volker Brendel (IEEE ACM Trans. Comput. Biol. Bioinform., 2010)

A Knowledge Representation Practionary - Guidelines Based on Charles Sanders Peirce - Michael K. Bergman (Springer, 2018)