Host-pathogen systems biology: logical modelling of hepatocyte growth factor and Helicobacter pylori induced c-Met signal transduction. - Raimo Franke; Melanie Müller; Nicole Wundrack; Ernst Dieter Gilles; Steffen Klamt; Thilo Kähne; Michael Naumann (BMC Syst. Biol., 2008)

Dynamics of p53 and NF-κ. - Rainer Poltz; Michael Naumann (BMC Syst. Biol., 2012)

Platform for model-based design and testing for deep brain stimulation. - Ilija Jovanov; Michael Naumann; Karthik Kumaravelu; Warren M. Grill 001; Miroslav Pajic (ICCPS, 2018)

Learning-based control design for deep brain stimulation. - Ilija Jovanov; Michael Naumann; Karthik Kumaravelu; Vuk Lesi; Aditya Zutshi 001; Warren M. Grill 001; Miroslav Pajic (ICCPS, 2018)

Model-Based Design of Closed Loop Deep Brain Stimulation Controller using Reinforcement Learning. - Qitong Gao; Michael Naumann; Ilija Jovanov; Vuk Lesi; Karthik Kumaravelu; Warren M. Grill 001; Miroslav Pajic (ICCPS, 2020)

Structural Dynamics of Lys11-Selective Deubiquitinylase Cezanne-1 during the Catalytic Cycle. - Metehan Ilter; Eric Schulze-Niemand; Michael Naumann; Matthias Stein (J. Chem. Inf. Model., 2023)

Activation and Reactivity of the Deubiquitinylase OTU Cezanne-2 from MD Simulations and QM/MM Calculations. - Metehan Ilter; Andrés M. Escorcia; Eric Schulze-Niemand; Michael Naumann; Matthias Stein (J. Chem. Inf. Model., 2025)