Automatic Annotation of Protein Functional Class from Sparse and Imbalanced Data Sets. - Jaehee Jung; Michael R. Thon (VDMB, 2006)

Identifying clusters of functionally related genes in genomes. - Gangman Yi; Sing-Hoi Sze; Michael R. Thon (Bioinform., 2007)

Gene function prediction using protein domain probability and hierarchical Gene Ontology information. - Jaehee Jung; Michael R. Thon (ICPR, 2008)

A Bound on Modeling Error in Observable Operator Models and an Associated Learning Algorithm. - Mingjie Zhao 001; Herbert Jaeger; Michael R. Thon (Neural Comput., 2009)

Making the Error-Controlling Algorithm of Observable Operator Models Constructive. - Mingjie Zhao 001; Herbert Jaeger; Michael R. Thon (Neural Comput., 2009)

PoGO: Prediction of Gene Ontology terms for fungal proteins. - Jaehee Jung; Gangman Yi; Serenella A. Sukno; Michael R. Thon (BMC Bioinform., 2010)

Identifying Gene Clusters within Localized Regions in Multiple Genomes. - Qingwu Yang; Gangman Yi; Fenghui Zhang; Michael R. Thon; Sing-Hoi Sze (J. Comput. Biol., 2010)

Supervised Protein Family Classification and New Family Construction. - Gangman Yi; Michael R. Thon; Sing-Hoi Sze (J. Comput. Biol., 2012)

Links between multiplicity automata, observable operator models and predictive state representations: a unified learning framework. - Michael R. Thon; Herbert Jaeger (J. Mach. Learn. Res., 2015)