Abstracted Stochastic Analysis of Type 1 Pili Expression in E.coli. - Hiroyuki Kuwahara; Chris J. Myers; Michael S. Samoilov (BIOCOMP, 2006)

Automated Abstraction Methodology for Genetic Regulatory Networks. - Hiroyuki Kuwahara; Chris J. Myers; Michael S. Samoilov; Nathan A. Barker; Adam P. Arkin (Trans. Comp. Sys. Biology, 2006)

Inference of binding sites with a Bayesian multiple-instance motif discovery method. - Guido H. Jajamovich; Michael S. Samoilov; Xiaodong Wang 001; Adam P. Arkin (Allerton, 2010)

Predictive analysis of concealed social network activities based on communication technology choices: early-warning detection of attack signals from terrorist organizations. - Katya Drozdova; Michael S. Samoilov (Comput. Math. Organ. Theory, 2010)

Temperature Control of Fimbriation Circuit Switch in Uropathogenic Escherichia coli: Quantitative Analysis via Automated Model Abstraction. - Hiroyuki Kuwahara; Chris J. Myers; Michael S. Samoilov (PLoS Comput. Biol., 2010)

Inference of gene regulatory networks from genome-wide knockout fitness data. - Liming Wang 004; Xiaodong Wang 001; Adam P. Arkin; Michael S. Samoilov (Bioinform., 2013)

Reconstruction of novel transcription factor regulons through inference of their binding sites. - Abdulkadir Elmas; Xiaodong Wang 001; Michael S. Samoilov (BMC Bioinform., 2015)