An automatic method for robust and fast cell detection in bright field images from high-throughput microscopy. - Felix Buggenthin; Carsten Marr; Michael Schwarzfischer; Philipp S. Hoppe; Oliver Hilsenbeck; Timm Schroeder; Fabian J. Theis (BMC Bioinform., 2013)

Centroid Clustering of Cellular Lineage Trees. - Valeriy Khakhutskyy; Michael Schwarzfischer; Nina C. Hubig; Claudia Plant; Carsten Marr; Michael A. Rieger; Timm Schroeder; Fabian J. Theis (ITBAM, 2014)

An adaptive scheduling scheme for calculating Bayes factors with thermodynamic integration using Simpson's rule. - Sabine Hug; Michael Schwarzfischer; Jan Hasenauer; Carsten Marr; Fabian J. Theis (Stat. Comput., 2016)

fastER: a user-friendly tool for ultrafast and robust cell segmentation in large-scale microscopy. - Oliver Hilsenbeck; Michael Schwarzfischer; Dirk Loeffler; Sotiris Dimopoulos; Simon Hastreiter; Carsten Marr; Fabian J. Theis; Timm Schroeder (Bioinform., 2017)