Assessing search strategies for flexible docking. - Michal Vieth; Jonathan D. Hirst; Brian N. Dominy; Heidi Daigler; Charles L. Brooks III (J. Comput. Chem., 1998)

Assessing energy functions for flexible docking. - Michal Vieth; Jonathan D. Hirst; Andrzej Kolinski; Charles L. Brooks III (J. Comput. Chem., 1998)

Detailed analysis of grid-based molecular docking: A case study of CDOCKER - A CHARMm-based MD docking algorithm. - Guosheng Wu; Daniel H. Robertson; Charles L. Brooks III; Michal Vieth (J. Comput. Chem., 2003)

Geometric Accuracy of Three-Dimensional Molecular Overlays. - Qi Chen; Richard E. Higgs; Michal Vieth (J. Chem. Inf. Model., 2006)

Lessons in Molecular Recognition, 2. Assessing and Improving Cross-Docking Accuracy. - Jeffrey J. Sutherland; Ravi Nandigam; Jon A. Erickson; Michal Vieth (J. Chem. Inf. Model., 2007)

Knowledge-Based Strategy to Improve Ligand Pose Prediction Accuracy for Lead Optimization. - Cen Gao; Nels Thorsteinson; Ian A. Watson; Ji-Bo Wang; Michal Vieth (J. Chem. Inf. Model., 2015)

Are induced fit protein conformational changes caused by ligand-binding predictable? A molecular dynamics investigation. - Cen Gao; Jérémy Desaphy; Michal Vieth (J. Comput. Chem., 2017)