HerEOS: A framework for consistent treatment of the Equation of State in ALE hydrodynamics. - Michal Zeman; Milan Holec; Pavel Váchal (Comput. Math. Appl., 2019)

Systems biology approach for analysis of mobile genetic elements in chicken gut microbiome. - Jana Schwarzerova; Michal Zeman; Ivan Rychlik; Wolfram Weckwerth; Ivo Provazník; Monika Dolejská; Darina Cejková (BIBM, 2022)