New algorithms to represent complex pseudoknotted RNA structures in dot-bracket notation. - Maciej Antczak; Mariusz Popenda; Tomasz Zok; Michal Zurkowski; Ryszard W. Adamiak; Marta Szachniuk (Bioinform., 2018)

RNApdbee 2.0: multifunctional tool for RNA structure annotation. - Tomasz Zok; Maciej Antczak; Michal Zurkowski; Mariusz Popenda; Jacek Blazewicz; Ryszard W. Adamiak; Marta Szachniuk (Nucleic Acids Res., 2018)

DrawTetrado to create layer diagrams of G4 structures. - Michal Zurkowski; Tomasz Zok; Marta Szachniuk (Bioinform., 2022)

ONQUADRO: a database of experimentally determined quadruplex structures. - Tomasz Zok; Natalia Kraszewska; Joanna Miskiewicz; Paulina Pielacinska; Michal Zurkowski; Marta Szachniuk (Nucleic Acids Res., 2022)

High-quality, customizable heuristics for RNA 3D structure alignment. - Michal Zurkowski; Maciej Antczak; Marta Szachniuk (Bioinform., 2023)

WebTetrado: a webserver to explore quadruplexes in nucleic acid 3D structures. - Bartosz Adamczyk; Michal Zurkowski; Marta Szachniuk; Tomasz Zok (Nucleic Acids Res., 2023)