Consistent AdaBoost for Boosting Stumps. - Michel A. Cuendet; Abderrahim Labbi (ICMLA, 2002)

SwissParam: A fast force field generation tool for small organic molecules. - Vincent Zoete; Michel A. Cuendet; Aurélien Grosdidier; Olivier Michielin (J. Comput. Chem., 2011)

Graphic Encoding of Macromolecules for Efficient High-Throughput Analysis. - Trilce Estrada; Jeremy Benson; Hector Carrillo-Cabada; Asghar M. Razavi; Michel A. Cuendet; Harel Weinstein; Ewa Deelman; Michela Taufer (BCB, 2018)

Clinical Guidelines: A Crossroad of Many Research Areas. Challenges and Opportunities in Process Mining for Healthcare. - Roberto Gatta; Mauro Vallati; Carlos Fernández-Llatas; Antonio Martinez-Millana; Stefania Orini; Lucia Sacchi; Jacopo Lenkowicz; Mar Marcos; Jorge Munoz-Gama; Michel A. Cuendet; Berardino De Bari; Luis Marco-Ruiz; et al. (Business Process Management Workshops, 2019)

Characterizing In Situ and In Transit Analytics of Molecular Dynamics Simulations for Next-Generation Supercomputers. - Michela Taufer; Ewa Deelman; Stephen Thomas; Michael R. Wyatt II; Tu Mai Anh Do; Loïc Pottier; Rafael Ferreira da Silva; Harel Weinstein; Michel A. Cuendet; Trilce Estrada (eScience, 2019)

A Novel Metric to Evaluate In Situ Workflows. - Tu Mai Anh Do; Loïc Pottier; Stephen Thomas; Rafael Ferreira da Silva; Michel A. Cuendet; Harel Weinstein; Trilce Estrada; Michela Taufer; Ewa Deelman (ICCS (1), 2020)

A Process Mining Approach to Statistical Analysis: Application to a Real-World Advanced Melanoma Dataset. - Erica Tavazzi; Camille L. Gerard; Olivier Michielin; Alexandre Wicky; Roberto Gatta; Michel A. Cuendet (ICPM Workshops, 2020)

SPHN/PHRT - MedCo in Action: Empowering the Swiss Molecular Tumor Board with Privacy-Preserving and Real-Time Patient Discovery. - Jean Louis Raisaro; Juan Ramón Troncoso-Pastoriza; Sylvain Pradervand; Michel A. Cuendet; Mickaël Misbach; João Sá Sousa; Francesco Marino; Nicolas Freundler; Nicolas Rosat; David Cavin; Alexander B. Leichtle; Jacques Fellay; et al. (MIE, 2020)

A lightweight method for evaluating in situ workflow efficiency. - Tu Mai Anh Do; Loïc Pottier; Silvina Caíno-Lores; Rafael Ferreira da Silva; Michel A. Cuendet; Harel Weinstein; Trilce Estrada; Michela Taufer; Ewa Deelman (J. Comput. Sci., 2021)

A Graphic Encoding Method for Quantitative Classification of Protein Structure and Representation of Conformational Changes. - Hector Carrillo-Cabada; Jeremy Benson; Asghar M. Razavi; Brianna Mulligan; Michel A. Cuendet; Harel Weinstein; Michela Taufer; Trilce Estrada (IEEE ACM Trans. Comput. Biol. Bioinform., 2021)

Online Boosted Gaussian Learners for In-Situ Detection and Characterization of Protein Folding States in Molecular Dynamics Simulations. - Harshita Sahni; Hector Carrillo-Cabada; Ekaterina D. Kots; Silvina Caíno-Lores; Jack Marquez; Ewa Deelman; Michel A. Cuendet; Harel Weinstein; Michela Taufer; Trilce Estrada (e-Science, 2023)

Runtime Steering of Molecular Dynamics Simulations Through In Situ Analysis and Annotation of Collective Variables. - Silvina Caíno-Lores; Michel A. Cuendet; Jack Marquez; Ekaterina D. Kots; Trilce Estrada; Ewa Deelman; Harel Weinstein; Michela Taufer (PASC, 2023)

HoverFast: an accurate, high-throughput, clinically deployable nuclear segmentation tool for brightfield digital pathology images. - Petros Liakopoulos; Julien Massonnet; Jonatan Bonjour; Medya Tekes Mizrakli; Simon Graham; Michel A. Cuendet; Amanda H. Seipel; Olivier Michielin; Doron Merkler; Andrew Janowczyk (J. Open Source Softw., 2024)