Molecular Dynamics Simulations of the Ligand-Induced Chemical Information Transfer in the 5-HT1A Receptor. - Michele Seeber; Pier Giuseppe De Benedetti; Francesca Fanelli (J. Chem. Inf. Comput. Sci., 2003)

Probing Fragment Complementation by Rigid-Body Docking: in Silico Reconstitution of Calbindin D9k. - Daniele Dell'Orco; Michele Seeber; Pier Giuseppe De Benedetti; Francesca Fanelli (J. Chem. Inf. Model., 2005)

Quaternary structure predictions of transmembrane proteins starting from the monomer: a docking-based approach. - Daniele Casciari; Michele Seeber; Francesca Fanelli (BMC Bioinform., 2006)

Wordom: a program for efficient analysis of molecular dynamics simulations. - Michele Seeber; Marco Cecchini; Francesco Rao; Giovanni Settanni; Amedeo Caflisch (Bioinform., 2007)

Wordom: A user-friendly program for the analysis of molecular structures, trajectories, and free energy surfaces. - Michele Seeber; Angelo Felline; Francesco Raimondi 001; Stefanie Muff; Ran Friedman; Francesco Rao; Amedeo Caflisch; Francesca Fanelli (J. Comput. Chem., 2011)

WebPSN: a web server for high-throughput investigation of structural communication in biomacromolecules. - Michele Seeber; Angelo Felline; Francesco Raimondi 001; Simona Mariani; Francesca Fanelli (Bioinform., 2015)

webPSN v2.0: a webserver to infer fingerprints of structural communication in biomacromolecules. - Angelo Felline; Michele Seeber; Francesca Fanelli (Nucleic Acids Res., 2020)