Bayesian Tracking of Elongated Structures in 3D Images. - Michiel Schaap; Ihor Smal; Coert Metz; Theo van Walsum; Wiro J. Niessen (IPMI, 2007)

Semi-Automatic Coronary Artery Centerline Extraction in Computed Tomography Angiography Data. - Coert Metz; Michiel Schaap; Alina G. van der Giessen; Theo van Walsum; Wiro J. Niessen (ISBI, 2007)

Bayesian Tracking of Tubular Structures and Its Application to Carotid Arteries in CTA. - Michiel Schaap; Rashindra Manniesing; Ihor Smal; Theo van Walsum; Aad van der Lugt; Wiro J. Niessen (MICCAI (2), 2007)

Averaging Centerlines: Mean Shift on Paths. - Theo van Walsum; Michiel Schaap; Coert Metz; Alina G. van der Giessen; Wiro J. Niessen (MICCAI (1), 2008)

Fast Noise Reduction in Computed Tomography for Improved 3-D Visualization. - Michiel Schaap; Arnold M. R. Schilham; Karel J. Zuiderveld; Mathias Prokop; Evert-Jan Vonken; Wiro J. Niessen (IEEE Trans. Medical Imaging, 2008)

Coronary Lumen Segmentation Using Graph Cuts and Robust Kernel Regression. - Michiel Schaap; Lisan Neefjes; Coert Metz; Alina G. van der Giessen; Annick C. Weustink; Nico Mollet; Jolanda J. Wentzel; Theo van Walsum; Wiro J. Niessen (IPMI, 2009)

GPU Accelerated Alignment of 3-D CTA with 2-D X-Ray Data for Improved Guidance in Coronary Interventions. - Coert Metz; Michiel Schaap; Stefan Klein 001; Annick C. Weustink; Nico Mollet; Carl J. Schultz; Robert Jan van Geuns; Patrick W. Serruys; Theo van Walsum; Wiro J. Niessen (ISBI, 2009)

Patient Specific 4D Coronary Models from ECG-gated CTA Data for Intra-operative Dynamic Alignment of CTA with X-ray Images. - Coert Metz; Michiel Schaap; Stefan Klein 001; Lisan Neefjes; Ermanno Capuano; Carl J. Schultz; Robert Jan van Geuns; Patrick W. Serruys; Theo van Walsum; Wiro J. Niessen (MICCAI (1), 2009)

Standardized evaluation methodology and reference database for evaluating coronary artery centerline extraction algorithms. - Michiel Schaap; Coert Metz; Theo van Walsum; Alina G. van der Giessen; Annick C. Weustink; Nico Mollet; Christian Bauer 001; Hrvoje Bogunovic; Carlos Castro-Gonzalez; Xiang Deng; Engin Dikici; Thomas O'Donnell; et al. (Medical Image Anal., 2009)

A patient-specific coronary density estimate. - Rahil Khurram Shahzad; Michiel Schaap; Theo van Walsum; Stefan Klein 001; Annick C. Weustink; Lucas J. van Vliet; Wiro J. Niessen (ISBI, 2010)

Statistical Analysis of Structural Brain Connectivity. - Renske de Boer; Michiel Schaap; Fedde van der Lijn; Henri A. Vrooman; Marius de Groot; Meike W. Vernooij; Mohammad Arfan Ikram; Evert F. S. van Velsen; Aad van der Lugt; Monique M. B. Breteler (MICCAI (2), 2010)

Conditional Shape Models for Cardiac Motion Estimation. - Coert Metz; Nora Baka; Hortense A. Kirisli; Michiel Schaap; Theo van Walsum; Stefan Klein 001; Lisan Neefjes; Nico Mollet; Boudewijn P. F. Lelieveldt; Marleen de Bruijne (MICCAI (1), 2010)

A Semi-automatic Method for Segmentation of the Carotid Bifurcation and Bifurcation Angle Quantification on Black Blood MRA. - Hui Tang; Robbert S. van Onkelen; Theo van Walsum; Reinhard Hameeteman; Michiel Schaap; Fufa L. Tori; Quirijn J. A. van den Bouwhuijsen; Jacqueline C. M. Witteman; Aad van der Lugt; Lucas J. van Vliet (MICCAI (3), 2010)

Fully automatic cardiac segmentation from 3D CTA data: a multi-atlas based approach. - Hortense A. Kirisli; Michiel Schaap; Stefan Klein 001; Lisan Neefjes; Annick C. Weustink; Theo van Walsum; Wiro J. Niessen (Image Processing, 2010)

Robust CTA lumen segmentation of the atherosclerotic carotid artery bifurcation in a large patient population. - Rashindra Manniesing; Michiel Schaap; Sietske Rozie; Reinhard Hameeteman; Danijela Vukadinovic; Aad van der Lugt; Wiro J. Niessen (Medical Image Anal., 2010)

Comparison of Shape Regression Methods under Landmark Position Uncertainty. - Nora Baka; Coert Metz; Michiel Schaap; Boudewijn P. F. Lelieveldt; Wiro J. Niessen; Marleen de Bruijne (MICCAI (2), 2011)

Alignment of 4D Coronary CTA with Monoplane X-ray Angiography. - Coert Metz; Michiel Schaap; Stefan Klein 001; Peter R. Rijnbeek; Lisan Neefjes; Nico Mollet; Carl J. Schultz; Patrick W. Serruys; Wiro J. Niessen; Theo van Walsum (AE-CAI, 2011)

Multispectral MRI centerline tracking in carotid arteries. - Hui Tang; Theo van Walsum; Robbert S. van Onkelen; Stefan Klein 001; Reinhard Hameeteman; Michiel Schaap; Quirijn J. A. van den Bouwhuijsen; Jacqueline C. M. Witteman; Aad van der Lugt; Lucas J. van Vliet; Wiro J. Niessen (Image Processing, 2011)

Evaluation framework for carotid bifurcation lumen segmentation and stenosis grading. - K. Hameeteman; Maria A. Zuluaga; Moti Freiman; Leo Joskowicz; Olivier Cuisenaire; Leonardo Floréz-Valencia; Mehmet Akif Gülsün; Karl Krissian; Julien Mille; Wilbur C. K. Wong; Maciej Orkisz; Hüseyin Tek; et al. (Medical Image Anal., 2011)

Nonrigid registration of dynamic medical imaging data using nD + t B-splines and a groupwise optimization approach. - Coert Metz; Stefan Klein 001; Michiel Schaap; Theo van Walsum; Wiro J. Niessen (Medical Image Anal., 2011)

Statistical analysis of minimum cost path based structural brain connectivity. - Renske de Boer; Michiel Schaap; Fedde van der Lijn; Henri A. Vrooman; Marius de Groot; Aad van der Lugt; Mohammad Arfan Ikram; Meike W. Vernooij; Monique M. B. Breteler; Wiro J. Niessen (NeuroImage, 2011)

Robust Shape Regression for Supervised Vessel Segmentation and its Application to Coronary Segmentation in CTA. - Michiel Schaap; Theo van Walsum; Lisan Neefjes; Coert Metz; Ermanno Capuano; Marleen de Bruijne; Wiro J. Niessen (IEEE Trans. Medical Imaging, 2011)

Automatic detection of calcified lesions in the descending aorta using contrast enhanced CT scans. - Rahil Khurram Shahzad; Michiel Schaap; Frederico Bastos Goncalves; Coert Metz; Hui Tang; Theo van Walsum; Adriaan Moelker; Lucas J. van Vliet; Wiro J. Niessen (ISBI, 2012)

Lumen segmentation of atherosclerotic carotid arteries in CTA. - Hui Tang; Theo van Walsum; Reinhard Hameeteman; Michiel Schaap; Aad van der Lugt; Lucas J. van Vliet; Wiro J. Niessen (ISBI, 2012)

Comprehensive visualization of multimodal cardiac imaging data for assessment of coronary artery disease: first clinical results of the SMARTVis tool. - Hortense A. Kirisli; Vikas Gupta; Sharon W. Kirschbaum; Alexia Rossi; Coert Metz; Michiel Schaap; Robert Jan van Geuns; Nico Mollet; Boudewijn P. F. Lelieveldt; Johan H. C. Reiber; Theo van Walsum; Wiro J. Niessen (Int. J. Comput. Assist. Radiol. Surg., 2012)

Cardiac motion-corrected iterative cone-beam CT reconstruction using a semi-automatic minimum cost path-based coronary centerline extraction. - Alfonso A. Isola; Coert Metz; Michiel Schaap; Stefan Klein 001; Michael Grass 001; Wiro J. Niessen (Comput. Medical Imaging Graph., 2012)

Semiautomatic carotid lumen segmentation for quantification of lumen geometry in multispectral MRI. - Hui Tang; Theo van Walsum; Robbert S. van Onkelen; Reinhard Hameeteman; Stefan Klein 001; Michiel Schaap; Fufa L. Tori; Quirijn J. A. van den Bouwhuijsen; Jacqueline C. M. Witteman; Aad van der Lugt; Lucas J. van Vliet; Wiro J. Niessen (Medical Image Anal., 2012)

Statistical Shape Model-Based Femur Kinematics From Biplane Fluoroscopy. - Nora Baka; Marleen de Bruijne; Theo van Walsum; Bart L. Kaptein; J. E. Giphart; Michiel Schaap; Wiro J. Niessen; Boudewijn P. F. Lelieveldt (IEEE Trans. Medical Imaging, 2012)

Regression-Based Cardiac Motion Prediction From Single-Phase CTA. - Coert Metz; Nora Baka; Hortense A. Kirisli; Michiel Schaap; Stefan Klein 001; Lisan Neefjes; Nico Mollet; Boudewijn P. F. Lelieveldt; Marleen de Bruijne; Wiro J. Niessen; Theo van Walsum (IEEE Trans. Medical Imaging, 2012)

Automatic multi-atlas segmentation using dual registrations. - Jung W. Suh; Michiel Schaap; Ann Lee 004; Nam Do; Alexis Ahiekpor-Dravi; Ying Bai; Gilwoo Choi; Romain Moreau-Gobard (ISBI, 2013)

Standardized evaluation framework for evaluating coronary artery stenosis detection, stenosis quantification and lumen segmentation algorithms in computed tomography angiography. - Hortense A. Kirisli; Michiel Schaap; Coert Metz; A. S. Dharampal; W. B. Meijboom; S. L. Papadopoulou; A. Dedic; K. Nieman; Michiel A. de Graaf; M. F. L. Meijs; M. J. Cramer; Alexander Broersen; et al. (Medical Image Anal., 2013)

Registration of 3D+t Coronary CTA and Monoplane 2D+t X-Ray Angiography. - Coert Metz; Michiel Schaap; Stefan Klein 001; Nora Baka; Lisan Neefjes; Carl J. Schultz; Wiro J. Niessen; Theo van Walsum (IEEE Trans. Medical Imaging, 2013)

HALE: Healthy Area of Lumen Estimation for Vessel Stenosis Quantification. - Sethuraman Sankaran; Michiel Schaap; Stanley C. Hunley; James K. Min; Charles A. Taylor; Leo J. Grady (MICCAI (3), 2016)

Image-and-Spatial Transformer Networks for Structure-Guided Image Registration. - Matthew C. H. Lee; Ozan Oktay; Andreas Schuh; Michiel Schaap; Ben Glocker (MICCAI (2), 2019)

Physics driven reduced order model for real time blood flow simulations. - Sethuraman Sankaran; David Lesage; Rhea Tombropoulos; Nan Xiao; Hyun Jin Kim 003; David Spain; Michiel Schaap; Charles A. Taylor (CoRR, 2019)

Attention gated networks: Learning to leverage salient regions in medical images. - Jo Schlemper; Ozan Oktay; Michiel Schaap; Mattias P. Heinrich; Bernhard Kainz; Ben Glocker; Daniel Rueckert (Medical Image Anal., 2019)

Generation of Patient-Specific Cardiac Vascular Networks: A Hybrid Image-Based and Synthetic Geometric Model. - Clara Jaquet; Laurent Najman; Hugues Talbot; Leo J. Grady; Michiel Schaap; Buzzy Spain; Hyun Jin Kim 003; Irene E. Vignon-Clementel; Charles A. Taylor (IEEE Trans. Biomed. Eng., 2019)

TeTrIS: Template Transformer Networks for Image Segmentation With Shape Priors. - Matthew C. H. Lee; Kersten Petersen; Nick Pawlowski; Ben Glocker; Michiel Schaap (IEEE Trans. Medical Imaging, 2019)

Atlas-ISTN: Joint segmentation, registration and atlas construction with image-and-spatial transformer networks. - Matthew Sinclair; Andreas Schuh; Karl Hahn; Kersten Petersen; Ying Bai; James Batten; Michiel Schaap; Ben Glocker (Medical Image Anal., 2022)

Morphology-based non-rigid registration of coronary computed tomography and intravascular images through virtual catheter path optimization. - Karim Kadry; Abhishek Karmakar; Andreas Schuh; Kersten Petersen; Michiel Schaap; David Marlevi; Charles A. Taylor; Elazer R. Edelman; Farhad Rikhtegar Nezami (CoRR, 2023)

Image To Tree with Recursive Prompting. - James Batten; Matthew Sinclair; Ben Glocker; Michiel Schaap (CoRR, 2023)

Simple Synthetic Angiography 0.1. - James Batten; Ben Glocker; Michiel Schaap (Zenodo, 2023)

A Diffusion Model for Simulation Ready Coronary Anatomy with Morpho-Skeletal Control. - Karim Kadry; Shreya Gupta; Jonas Sogbadji; Michiel Schaap; Kersten Petersen; Takuya Mizukami; Carlos Collet; Farhad Rikhtegar Nezami; Elazer R. Edelman (ECCV (78), 2024)

Image-To-Tree with Recursive Prompting. - James Batten; Matthew Sinclair; Ying Bai; Ben Glocker; Michiel Schaap (ISBI, 2024)

Morphology-Based Non-Rigid Registration of Coronary Computed Tomography and Intravascular Images Through Virtual Catheter Path Optimization. - Karim Kadry; Max L. Olender; Andreas Schuh; Abhishek Karmakar; Kersten Petersen; Michiel Schaap; David Marlevi; Adam UpdePac; Takuya Mizukami; Charles Taylor; Elazer R. Edelman; Farhad Rikhtegar Nezami (IEEE Trans. Medical Imaging, 2025)

Vector Representations of Vessel Trees. - James Batten; Michiel Schaap; Matthew Sinclair; Ying Bai; Ben Glocker (CoRR, 2025)