Metagenomics reveals our incomplete knowledge of global diversity. - Miguel Pignatelli; Gabriel Aparício; Ignacio Blanquer; Vicente Hernández; Andrés Moya; Javier Tamames (Bioinform., 2008)

CROC: finding chromosomal clusters in eukaryotic genomes. - Miguel Pignatelli; Florenci Serras; Andrés Moya; Roderic Guigó; Montserrat Corominas (Bioinform., 2009)

Ensembl 2012. - Paul Flicek; M. Ridwan Amode; Daniel Barrell; Kathryn Beal; Simon Brent; Denise Carvalho-Silva; Peter Clapham; Guy Coates; Susan Fairley; Stephen Fitzgerald; Laurent Gil; Leo Gordon; et al. (Nucleic Acids Res., 2012)

Ensembl 2013. - Paul Flicek; Ikhlak Ahmed; M. Ridwan Amode; Daniel Barrell; Kathryn Beal; Simon Brent; Denise Carvalho-Silva; Peter Clapham; Guy Coates; Susan Fairley; Stephen Fitzgerald; Laurent Gil; et al. (Nucleic Acids Res., 2013)

Ensembl 2014. - Paul Flicek; M. Ridwan Amode; Daniel Barrell; Kathryn Beal; Konstantinos Billis; Simon Brent; Denise Carvalho-Silva; Peter Clapham; Guy Coates; Stephen Fitzgerald; Laurent Gil; Carlos García-Girón; et al. (Nucleic Acids Res., 2014)

TreeFam v9: a new website, more species and orthology-on-the-fly. - Fabian Schreiber; Mateus Patricio; Matthieu Muffato; Miguel Pignatelli; Alex Bateman (Nucleic Acids Res., 2014)

The Ensembl REST API: Ensembl Data for Any Language. - Andrew D. Yates; Kathryn Beal; Stephen Keenan; William M. McLaren; Miguel Pignatelli; Graham R. S. Ritchie; Magali Ruffier; Kieron R. Taylor; Alessandro Vullo; Paul Flicek (Bioinform., 2015)

Ensembl 2015. - Fiona Cunningham; M. Ridwan Amode; Daniel Barrell; Kathryn Beal; Konstantinos Billis; Simon Brent; Denise Carvalho-Silva; Peter Clapham; Guy Coates; Stephen Fitzgerald; Laurent Gil; Carlos García-Girón; et al. (Nucleic Acids Res., 2015)

Ensembl comparative genomics resources. - Javier Herrero; Matthieu Muffato; Kathryn Beal; Stephen Fitzgerald; Leo Gordon; Miguel Pignatelli; Albert J. Vilella; Stephen M. J. Searle; M. Ridwan Amode; Simon Brent; William Spooner; Eugene Kulesha; et al. (Database J. Biol. Databases Curation, 2016)

ncRNA orthologies in the vertebrate lineage. - Miguel Pignatelli; Albert J. Vilella; Matthieu Muffato; Leo Gordon; Simon White; Paul Flicek; Javier Herrero (Database J. Biol. Databases Curation, 2016)

TnT: a set of libraries for visualizing trees and track-based annotations for the web. - Miguel Pignatelli (Bioinform., 2016)

Ensembl 2016. - Andrew D. Yates; Wasiu A. Akanni; M. Ridwan Amode; Daniel Barrell; Konstantinos Billis; Denise Carvalho-Silva; Carla A. Cummins; Peter Clapham; Stephen Fitzgerald; Laurent Gil; Carlos García-Girón; Leo Gordon; et al. (Nucleic Acids Res., 2016)

Open Targets: a platform for therapeutic target identification and validation. - Gautier Koscielny; Peter An; Denise Carvalho-Silva; Jennifer A. Cham; Luca Fumis; Rippa Gasparyan; Samiul Hasan; Nikiforos Karamanis; Michael Maguire; Eliseo Papa; Andrea Pierleoni; Miguel Pignatelli; et al. (Nucleic Acids Res., 2017)

iHam and pyHam: visualizing and processing hierarchical orthologous groups. - Clément-Marie Train; Miguel Pignatelli; Adrian M. Altenhoff; Christophe Dessimoz (Bioinform., 2019)

Open Targets Platform: new developments and updates two years on. - Denise Carvalho-Silva; Andrea Pierleoni; Miguel Pignatelli; Chuang Kee Ong; Luca Fumis; Nikiforos Karamanis; Miguel Carmona; Adam Faulconbridge; Andrew Hercules; Elaine McAuley; Alfredo Miranda; Gareth Peat; et al. (Nucleic Acids Res., 2019)

Project Score database: a resource for investigating cancer cell dependencies and prioritizing therapeutic targets. - Lisa Dwane; Fiona M. Behan; Emanuel J. V. Gonçalves; Howard Lightfoot; Wanjuan Yang; Dieudonne van der Meer; Rebecca Shepherd; Miguel Pignatelli; Francesco Iorio; Mathew Garnett (Nucleic Acids Res., 2021)

Open Targets Platform: supporting systematic drug-target identification and prioritisation. - David Ochoa; Andrew Hercules; Miguel Carmona; Daniel Suveges; Asier Gonzalez-Uriarte; Cinzia Malangone; Alfredo Miranda; Luca Fumis; Denise Carvalho-Silva; Michaela Spitzer; Jarrod Baker; Javier Ferrer; et al. (Nucleic Acids Res., 2021)