Towards Data-Driven Generation of Visualizations for Automatically Generated News Articles. - Rola Alhalaseh; Myriam Munezero; Miika Leinonen; Leo Leppänen; Jari Avikainen; Hannu Toivonen (MindTrek, 2018)

Optical map guided genome assembly. - Miika Leinonen; Leena Salmela (BMC Bioinform., 2020)

Extraction of Long k-mers Using Spaced Seeds. - Miika Leinonen; Leena Salmela (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)

Optical Maps in Genome Assembly and Long k-mer Extraction ; Optiset kartat genomin kasauksessa ja pitkien k-meerien laskenta. - Miika Leinonen (2024)

Space-efficient computation of k-mer dictionaries for large values of k. - Diego Díaz-Domínguez; Miika Leinonen; Leena Salmela (Algorithms Mol. Biol., 2024)