Zooming of states and parameters using a lumping approach including back-translation. - Mikael Sunnåker; Henning Schmidt; Mats Jirstrand; Gunnar Cedersund (BMC Syst. Biol., 2010)

A method for zooming of nonlinear models of biochemical systems. - Mikael Sunnåker; Gunnar Cedersund; Mats Jirstrand (BMC Syst. Biol., 2011)

Near-optimal experimental design for model selection in systems biology. - Alberto Giovanni Busetto; Alain Hauser; Gabriel Krummenacher; Mikael Sunnåker; Sotiris Dimopoulos; Cheng Soon Ong; Jörg Stelling; Joachim M. Buhmann (Bioinform., 2013)

Approximate Bayesian Computation. - Mikael Sunnåker; Alberto Giovanni Busetto; Elina Numminen; Jukka Corander; Matthieu Foll; Christophe Dessimoz (PLoS Comput. Biol., 2013)

Computational methods for automated construction and analysis of dynamical models of biochemical systems. - Mikael Sunnåker (2013)

Topological augmentation to infer hidden processes in biological systems. - Mikael Sunnåker; Elías Zamora-Sillero; Adrián López García de Lomana; Florian Rudroff; Uwe Sauer; Jörg Stelling; Andreas Wagner (Bioinform., 2014)

Efficient Characterization of Parametric Uncertainty of Complex (Bio)chemical Networks. - Claudia Schillings; Mikael Sunnåker; Jörg Stelling; Christoph Schwab (PLoS Comput. Biol., 2015)

TopoFilter: a MATLAB package for mechanistic model identification in systems biology. - Mikolaj Rybinski; Simon Möller; Mikael Sunnåker; Claude Lormeau; Jörg Stelling (BMC Bioinform., 2020)