Synteny Portal: a web-based application portal for synteny block analysis. - Jongin Lee; Woonyoung Hong; Minah Cho; Mikang Sim; Daehwan Lee; Younhee Ko; Jaebum Kim (Nucleic Acids Res., 2016)

The effect of reference species on reference-guided genome assembly. - Juyeon Kim; Daehwan Lee; Mikang Sim; Jongin Lee; Jaebum Kim (CSBio, 2017)

mySyntenyPortal: an application package to construct websites for synteny block analysis. - Jongin Lee; Daehwan Lee; Mikang Sim; Daehong Kwon; Juyeon Kim; Younhee Ko; Jaebum Kim (BMC Bioinform., 2018)

INTERSPIA: a web application for exploring the dynamics of protein-protein interactions among multiple species. - Daehong Kwon; Daehwan Lee; Juyeon Kim; Jongin Lee; Mikang Sim; Jaebum Kim (Nucleic Acids Res., 2018)

TAMA: improved metagenomic sequence classification through meta-analysis. - Mikang Sim; Jongin Lee; Daehwan Lee; Daehong Kwon; Jaebum Kim (BMC Bioinform., 2020)

msPIPE: a pipeline for the analysis and visualization of whole-genome bisulfite sequencing data. - Heesun Kim; Mikang Sim; Nayoung Park; Kisang Kwon; Junyoung Kim; Jaebum Kim (BMC Bioinform., 2022)

Assessing the impact of reference genomes on the quality of a reference-guided genome assembly. - Suyeon Wy; Junyoung Kim; Mikang Sim; Daehong Kwon; Jaebum Kim (BigComp, 2025)