Experimental Directory Structure (Exdir): An Alternative to HDF5 Without Introducing a New File Format. - Svenn-Arne Dragly; Milad Hobbi Mobarhan; Mikkel E. Lepperød; Simen Tennøe; Marianne Fyhn; Torkel Hafting; Anders Malthe-Sørenssen (Frontiers Neuroinformatics, 2018)

Computational geometry for modeling neural populations: From visualization to simulation. - Marc de Kamps; Mikkel E. Lepperød; Yi Ming Lai (PLoS Comput. Biol., 2019)

Experimental Pipeline (Expipe): A Lightweight Data Management Platform to Simplify the Steps From Experiment to Data Analysis. - Mikkel E. Lepperød; Svenn-Arne Dragly; Alessio Paolo Buccino; Milad Hobbi Mobarhan; Anders Malthe-Sørenssen; Torkel Hafting; Marianne Fyhn (Frontiers Neuroinformatics, 2020)

MIIND : A Model-Agnostic Simulator of Neural Populations. - Hugh Osborne; Yi Ming Lai; Mikkel E. Lepperød; David Sichau; Lukas Deutz; Marc de Kamps (Frontiers Neuroinformatics, 2021)

Isometric Representations in Neural Networks Improve Robustness. - Kosio Beshkov; Jonas Verhellen; Mikkel Elle Lepperød (CoRR, 2022)

Spikeometric: Linear Non-Linear Cascade Spiking Neural Networks with Pytorch Geometric. - Jakob L. Sønstebø; Herman Brunborg; Mikkel Elle Lepperød (J. Open Source Softw., 2023)

Inferring causal connectivity from pairwise recordings and optogenetics. - Mikkel Elle Lepperød; Tristan M. Stöber; Torkel Hafting; Marianne Fyhn; Konrad Paul Körding (PLoS Comput. Biol., 2023)

Learning Place Cell Representations and Context-Dependent Remapping. - Markus Pettersen; Frederik Rogge; Mikkel E. Lepperød (NeurIPS, 2024)

Exploring mechanisms of Neural Robustness: probing the bridge between geometry and spectrum. - Konstantin Holzhausen; Mia Merlid; Håkon Olav Torvik; Anders Malthe-Sørenssen; Mikkel Elle Lepperød (CoRR, 2024)

Hexagons all the way down: grid cells as a conformal isometric map of space. - Vemund Sigmundson Schøyen; Kosio Beshkov; Markus Pettersen; Erik Hermansen; Konstantin Holzhausen; Anders Malthe-Sørenssen; Marianne Fyhn; Mikkel Elle Lepperød (PLoS Comput. Biol., 2025)

EngramNCA: a Neural Cellular Automaton Model of Memory Transfer. - Etienne Guichard; Felix Reimers; Mia Kvalsund; Mikkel E. Lepperød; Stefano Nichele (CoRR, 2025)

ARC-NCA: Towards Developmental Solutions to the Abstraction and Reasoning Corpus. - Etienne Guichard; Felix Reimers; Mia Kvalsund; Mikkel E. Lepperød; Stefano Nichele (CoRR, 2025)

Exploring biologically inspired mechanisms of adversarial robustness. - Konstantin Holzhausen; Mia Merlid; Håkon Olav Torvik; Anders Malthe-Sørenssen; Mikkel Elle Lepperød (Neural Comput. Appl., 2025)

Correction: Exploring biologically inspired mechanisms of adversarial robustness. - Konstantin Holzhausen; Mia Merlid; Håkon Olav Torvik; Anders Malthe-Sørenssen; Mikkel Elle Lepperød (Neural Comput. Appl., 2025)

The Generalist Brain Module: Module Repetition in Neural Networks in Light of the Minicolumn Hypothesis. - Mia-Katrin Kvalsund; Mikkel Elle Lepperød (CoRR, 2025)