TopoLink: evaluation of structural models using chemical crosslinking distance constraints. - Allan J. R. Ferrari; Milan A. Clasen; Louise U. Kurt; Paulo C. Carvalho; Fábio C. Gozzo; Leandro Martínez (Bioinform., 2019)

Top-Down Garbage Collector: a tool for selecting high-quality top-down proteomics mass spectra. - Diogo B. Lima; André Ramos Fernandes Da Silva; Mathieu Dupré; Marlon D. M. Santos; Milan A. Clasen; Louise U. Kurt; Priscila F. Aquino; Valmir C. Barbosa; Paulo C. Carvalho; Julia Chamot-Rooke (Bioinform., 2019)

Characterizing protein conformers by cross-linking mass spectrometry and pattern recognition. - Louise U. Kurt; Milan A. Clasen; Marlon D. M. Santos; Eduardo S. B. Lyra; Luana O. Santos; Carlos H. I. Ramos; Diogo B. Lima; Fábio C. Gozzo; Paulo C. Carvalho (Bioinform., 2021)

Increasing confidence in proteomic spectral deconvolution through mass defect. - Milan A. Clasen; Louise U. Kurt; Marlon D. M. Santos; Diogo B. Lima; Fan Liu; Fábio C. Gozzo; Valmir C. Barbosa; Paulo C. Carvalho (Bioinform., 2022)