Molpher: a software framework for systematic chemical space exploration. - David Hoksza; Petr Skoda 001; Milan Vorsilák; Daniel Svozil (J. Cheminformatics, 2014)

Nonpher: computational method for design of hard-to-synthesize structures. - Milan Vorsilák; Daniel Svozil (J. Cheminformatics, 2017)

Comment on "The power metric: a new statistically robust enrichment-type metric for virtual screening applications with early recovery capability". - Martin Sícho; Milan Vorsilák; Daniel Svozil (J. Cheminformatics, 2018)

SYBA: Bayesian estimation of synthetic accessibility of organic compounds. - Milan Vorsilák; Michal Kolár; Ivan Cmelo; Daniel Svozil (J. Cheminformatics, 2020)

Profiling and analysis of chemical compounds using pointwise mutual information. - Ivan Cmelo; Milan Vorsilák; Daniel Svozil (J. Cheminformatics, 2021)