Stochastic Stage-structured Modeling of the Adaptive Immune System. - Dennis L. Chao; Miles P. Davenport; Stephanie Forrest; Alan S. Perelson (CSB, 2003)

Accurately Measuring Recombination between Closely Related HIV-1 Genomes. - Timothy E. Schlub; Redmond P. Smyth; Andrew J. Grimm; Johnson Mak; Miles P. Davenport (PLoS Comput. Biol., 2010)

The Dynamics of Naturally Acquired Immunity to Plasmodium falciparum Infection. - Mykola Pinkevych; Janka Petravic; Kiprotich Chelimo; James W. Kazura; Ann M. Moormann; Miles P. Davenport (PLoS Comput. Biol., 2012)