bSiteFinder, an improved protein-binding sites prediction server based on structural alignment: more accurate and less time-consuming. - Jun Gao; Qingchen Zhang; Min Liu 020; Lixin Zhu; Dingfeng Wu; Zhiwei Cao; Ruixin Zhu (J. Cheminformatics, 2016)

iATC-FRAKEL: a simple multi-label web server for recognizing anatomical therapeutic chemical classes of drugs with their fingerprints only. - Jian-Peng Zhou; Lei Chen 007; Tianyun Wang; Min Liu 020 (Bioinform., 2020)

Succinylation Site Prediction Based on Protein Sequences Using the IFS-LightGBM (BO) Model. - Lu Zhang; Min Liu 020; Xinyi Qin; Guangzhong Liu (Comput. Math. Methods Medicine, 2020)

Structural protein fold recognition based on secondary structure and evolutionary information using machine learning algorithms. - Xinyi Qin; Min Liu 020; Lu Zhang; Guangzhong Liu (Comput. Biol. Chem., 2021)

Identifying Protein Subcellular Locations With Embeddings-Based node2loc. - Xiaoyong Pan; Lei Chen 007; Min Liu 020; Zhibin Niu; Tao Huang 004; Yu-Dong Cai 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)

ASFold-DNN: Protein Fold Recognition Based on Evolutionary Features With Variable Parameters Using Full Connected Neural Network. - Xinyi Qin; Lu Zhang; Min Liu 020; Ziwei Xu; Guangzhong Liu (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)

ResCNNT-fold: Combining residual convolutional neural network and Transformer for protein fold recognition from language model embeddings. - Xinyi Qin; Min Liu 020; Guangzhong Liu (Comput. Biol. Medicine, 2023)

PRFold-TNN: Protein Fold Recognition With an Ensemble Feature Selection Method Using PageRank Algorithm Based on Transformer. - Xinyi Qin; Lu Zhang; Min Liu 020; Guangzhong Liu (IEEE ACM Trans. Comput. Biol. Bioinform., 2024)