Biomedical Case Studies in Data Intensive Computing. - Geoffrey C. Fox; Xiaohong Qiu; Scott Beason; Jong Youl Choi; Jaliya Ekanayake; Thilina Gunarathne; Mina Rho; Haixu Tang; Neil Devadasan; Gilbert C. Liu (CloudCom, 2009)

DACIDR: deterministic annealed clustering with interpolative dimension reduction using a large collection of 16S rRNA sequences. - Yang Ruan; Saliya Ekanayake; Mina Rho; Haixu Tang; Seung-Hee Bae; Judy Qiu; Geoffrey C. Fox (BCB, 2012)

Stitching gene fragments with a network matching algorithm improves gene assembly for metagenomics. - Yu-Wei Wu; Mina Rho; Thomas G. Doak; Yuzhen Ye (Bioinform., 2012)

Interpolative multidimensional scaling techniques for the identification of clusters in very large sequence sets. - Adam Hughes; Yang Ruan; Saliya Ekanayake; Seung-Hee Bae; Qunfeng Dong; Mina Rho; Judy Qiu; Geoffrey C. Fox (BMC Bioinform., 2012)

MGEScan: a Galaxy-based system for identifying retrotransposons in genomes. - Hyungro Lee; Min Su Lee; Wazim Mohammed Ismail; Mina Rho; Geoffrey C. Fox; Sangyoon Oh 001; Haixu Tang (Bioinform., 2016)

An Accurate, Efficient, and Scalable Approach to Channel Matching in Smart TVs. - Jiwon Hong; Sang-Wook Kim; Mina Rho; YoonHee Choi; Yoonsik Tak (SIGIR, 2017)

A Multimodal Deep Learning Method for Android Malware Detection Using Various Features. - TaeGuen Kim 002; BooJoong Kang; Mina Rho; Sakir Sezer; Eul Gyu Im (IEEE Trans. Inf. Forensics Secur., 2019)

MegaR: an interactive R package for rapid sample classification and phenotype prediction using metagenome profiles and machine learning. - Eliza Dhungel; Yassin Mreyoud; Ho-Jin Gwak; Ahmad Rajeh; Mina Rho; Tae-Hyuk Ahn (BMC Bioinform., 2021)

Transformer-based embedding applied to classify bacterial species using sequencing reads. - Ho-Jin Gwak; Mina Rho (BigComp, 2022)

ViBE: a hierarchical BERT model to identify eukaryotic viruses using metagenome sequencing data. - Ho-Jin Gwak; Mina Rho (Briefings Bioinform., 2022)

MultiChem: predicting chemical properties using multi-view graph attention network. - Heesang Moon; Mina Rho (BioData Min., 2025)