P1 nuclease defines a subpopulation of active SV40 chromatin - a new nuclease hypersensitivity assay. - Yi Chu; Taosheng Huang; Ming-Ta Hsu (Nucleic Acids Res., 1990)

ArrayFusion: a web application for multi-dimensional analysis of CGH, SNP and microarray data. - Tsun-Po Yang; Ting-Yu Chang; Chi-Hung Lin; Ming-Ta Hsu; Hsei-Wei Wang (Bioinform., 2006)

easyExon - A Java-based GUI tool for processing and visualization of Affymetrix exon array data. - Ting-Yu Chang; Yin-Yi Li; Chih-Hung Jen; Tsun-Po Yang; Chi-Hung Lin; Ming-Ta Hsu; Hsei-Wei Wang (BMC Bioinform., 2008)

Signature Evaluation Tool (SET): a Java-based tool to evaluate and visualize the sample discrimination abilities of gene expression signatures. - Chih-Hung Jen; Tsun-Po Yang; Chien-Yi Tung; Shu-Han Su; Chi-Hung Lin; Ming-Ta Hsu; Hsei-Wei Wang (BMC Bioinform., 2008)

Integrated analyses to reconstruct microRNA-mediated regulatory networks in mouse liver using high-throughput profiling. - Sheng-Da Hsu; Hsi-Yuan Huang; Chih-Hung Chou; Yi-Ming Sun; Ming-Ta Hsu; Ann-Ping Tsou (BMC Genom., 2015)