Ultrasound Imaging Simulation and Echocardiographic Image Synthesis. - Mingzhou Song 001; Robert M. Haralick; Florence H. Sheehan (ICIP, 2000)

Algorithm Performance Contest. - Selim Aksoy; Ming Ye; Michael L. Schauf; Mingzhou Song 001; Yalin Wang 001; Robert M. Haralick; Jim R. Parker; Juraj Pivovarov; Dominik Royko; Changming Sun; Gunnar Farnebäck (ICPR, 2000)

Single View Computer Vision in Polyhedral World: Geometric Inference and Performance Characterization. - Mingzhou Song 001; Aiwen Guo; Robert M. Haralick (ICPR, 2000)

Optimally Quantized and Smoothed Histograms. - Mingzhou Song 001; Robert M. Haralick (JCIS, 2002)

Integrated Surface Optimization for 3-D Freehand Echocardiography. - Mingzhou Song 001; Robert M. Haralick; Florence H. Sheehan; Richard K. Johnson (IEEE Trans. Medical Imaging, 2002)

Estimating Recombination Rate Distribution by Optimal Quantization. - Mingzhou Song 001; Stéphane Boissinot; Robert M. Haralick; Ihsin T. Phillips (CSB, 2003)

Detecting Low Complexity Clusters by Skewness and Kurtosis in Data Stream Clustering. - Mingzhou Song 001; Hongbin Wang (AI&M, 2006)

A Linear Discrete Dynamic System Model for Temporal Gene Interaction and Regulatory Network Influence in Response to Bioethanol Conversion Inhibitor HMF for Ethanologenic Yeast. - Mingzhou (Joe) Song; Z. Lewis Liu (Systems Biology and Computational Proteomics, 2006)

A spike sorting framework using nonparametric detection and incremental clustering. - Mingzhou (Joe) Song; Hongbin Wang (Neurocomputing, 2006)

Maximum Likelihood Quantization of Genomic Features Using Dynamic Programming. - Mingzhou (Joe) Song; Robert M. Haralick; Stéphane Boissinot (ICMLA, 2007)

Comparison of Cluster Representations from Partial Second- to Full Fourth-Order Cross Moments for Data Stream Clustering. - Mingzhou (Joe) Song; Lin Zhang (ICDM, 2008)

Comparative Identification of Differential Interactions from Trajectories of Dynamic Biological Networks. - Zhengyu Ouyang; Mingzhou Song 001 (GCB, 2009)

Comparative Generalized Logic Modeling Reveals Differential Gene Interactions during Cell Cycle Exit in Drosophila Wing Development. - Mingzhou Song 001; Chung-Chien Hong; Yang Zhang; Laura Buttitta; Bruce Edgar (GCB, 2009)

Statistical Analysis of Discrete Dynamical System Models for Biological Networks. - Zhengyu Ouyang; Mingzhou Song 001 (IJCBS, 2009)

Reconstructing Generalized Logical Networks of Transcriptional Regulation in Mouse Brain from Temporal Gene Expression Data. - Mingzhou (Joe) Song; Chris K. Lewis; Eric R. Lance; Elissa J. Chesler; Roumyana Kirova Yordanova; Michael A. Langston; Kerrie H. Lodowski; Susan E. Bergeson (EURASIP J. Bioinform. Syst. Biol., 2009)

Integrated cellular and gene interaction model for cell migration in embryonic development. - Hien Nguyen 003; Mingzhou Song 001 (BIBM Workshops, 2010)

Efficient and exact maximum likelihood quantisation of genomic features using dynamic programming. - Mingzhou (Joe) Song; Robert M. Haralick; Stéphane Boissinot (Int. J. Data Min. Bioinform., 2010)

Conserved and differential gene interactions in dynamical biological systems. - Zhengyu Ouyang; Mingzhou Song 001; Robert Güth; Thomas Ha; Matt Larouche; Daniel Goldowitz (Bioinform., 2011)

Integrated cellular and gene interaction modelling of pattern formation. - Hien Nguyen 003; Mingzhou Song 001 (Int. J. Comput. Biol. Drug Des., 2011)

Ckmeans.1d.dp: Optimal k-means Clustering in One Dimension by Dynamic Programming. - Haizhou Wang; Mingzhou Song 001 (R J., 2011)

Simulating Noisy, Nonparametric, and Multivariate Discrete Patterns. - Ruby Sharma; Sajal Kumar; Hua Zhong 002; Mingzhou Song 001 (R J., 2017)

Scrutinizing functional interaction networks from RNA-binding proteins to their targets in cancer. - Sajal Kumar; Hua Zhong 002; Ruby Sharma; Yiyi Li; Mingzhou Song 001 (BIBM, 2018)

Evaluating Model-free Directional Dependency Methods on Single-cell RNA Sequencing Data with Severe Dropout. - Eliska Dvoráková; Sajal Kumar; Jirí Kléma; Filip Zelezný; Karel Drbal; Mingzhou Song 001 (ICBRA, 2019)

A Fast Exact Functional Test for Directional Association and Cancer Biology Applications. - Hua Zhong 002; Mingzhou Song 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2019)

Three Co-expression Pattern Types across Microbial Transcriptional Networks of Plankton in Two Oceanic Waters. - Ruby Sharma; Xuye Luo; Sajal Kumar; Mingzhou Song 001 (BCB, 2020)

Joint Grid Discretization for Biological Pattern Discovery. - Jiandong Wang; Sajal Kumar; Mingzhou Song 001 (BCB, 2020)

Optimality, Accuracy, and Efficiency of an Exact Functional Test. - Hien Nguyen 003; Hua Zhong 002; Mingzhou Song 001 (IJCAI, 2020)

Efficient weighted univariate clustering maps outstanding dysregulated genomic zones in human cancers. - Mingzhou Song 001; Hua Zhong 002 (Bioinform., 2020)

Fundamental gene network rewiring at the second order within and across mammalian systems. - Ruby Sharma; Sajal Kumar; Mingzhou Song 001 (Bioinform., 2021)

Fast Optimal Circular Clustering and Applications on Round Genomes. - Tathagata Debnath; Mingzhou Song 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2021)

Overcoming biases in causal inference of molecular interactions. - Sajal Kumar; Mingzhou Song 001 (Bioinform., 2022)

Statistical evidence for the presence of trajectory in single-cell data. - Lovemore Tenha; Mingzhou Song 001 (BMC Bioinform., 2022)

Inference of trajectory presence by tree dimension and subset specificity by subtree cover. - Lovemore Tenha; Mingzhou Song 001 (PLoS Comput. Biol., 2022)

Circular Silhouette and a Fast Algorithm. - Yinong Chen; Tathagata Debnath; Andrew Cai; Mingzhou Song 001 (IEEE Trans. Pattern Anal. Mach. Intell., 2023)