MetaPar: Metagenomic sequence assembly via iterative reclassification. - Minji Kim 011; Jonathan G. Ligo; Amin Emad; Farzad Farnoud; Olgica Milenkovic; Venugopal V. Veeravalli (GlobalSIP, 2013)

MCUIUC - A new framework for metagenomic read compression. - Jonathan G. Ligo; Minji Kim 011; Amin Emad; Olgica Milenkovic; Venugopal V. Veeravalli (ITW, 2013)

MetaCRAM: an integrated pipeline for metagenomic taxonomy identification and compression. - Minji Kim 011; Xiejia Zhang; Jonathan G. Ligo; Farzad Farnoud; Venugopal V. Veeravalli; Olgica Milenkovic (BMC Bioinform., 2016)

Information theoretic and machine learning techniques for emerging genomic data analysis - Minji Kim 011 (2017)