GalaxyDock BP2 score: a hybrid scoring function for accurate protein-ligand docking. - Minkyung Baek; Woong-Hee Shin; Hwan Won Chung; Chaok Seok (J. Comput. Aided Mol. Des., 2017)

Absolute binding free energy calculations of CBClip host-guest systems in the SAMPL5 blind challenge. - Juyong Lee; Florentina Tofoleanu; Frank C. Pickard IV; Gerhard König; Jing Huang 004; Ana Damjanovic; Minkyung Baek; Chaok Seok; Bernard R. Brooks (J. Comput. Aided Mol. Des., 2017)

Absolute binding free energies for octa-acids and guests in SAMPL5 - Evaluating binding free energies for octa-acid and guest complexes in the SAMPL5 blind challenge. - Florentina Tofoleanu; Juyong Lee; Frank C. Pickard IV; Gerhard König; Jing Huang 004; Minkyung Baek; Chaok Seok; Bernard R. Brooks (J. Comput. Aided Mol. Des., 2017)

GalaxyHomomer: a web server for protein homo-oligomer structure prediction from a monomer sequence or structure. - Minkyung Baek; Taeyong Park 002; Lim Heo; Chiwook Park; Chaok Seok (Nucleic Acids Res., 2017)

GalaxyTongDock: Symmetric and asymmetric ab initio protein-protein docking web server with improved energy parameters. - Taeyong Park 002; Minkyung Baek; Hasup Lee 002; Chaok Seok (J. Comput. Chem., 2019)

GalaxyDock3: Protein-ligand docking that considers the full ligand conformational flexibility. - Jinsol Yang; Minkyung Baek; Chaok Seok (J. Comput. Chem., 2019)

GalaxyHeteromer: protein heterodimer structure prediction by template-based and ab initio docking. - Taeyong Park 002; Jonghun Won; Minkyung Baek; Chaok Seok (Nucleic Acids Res., 2021)

RFDesign: Protein hallucination and inpainting with RosettaFold. - Jue Wang; Sidney Lisanza; David Juergens; Doug Tischer; Joe Watson; Ivan Anishchenko; Minkyung Baek; Justas Dauparas; Sergey Ovchinnikov (Zenodo, 2022)