IntSide: a web server for the chemical and biological examination of drug side effects. - Teresa Juan-Blanco; Miquel Duran-Frigola; Patrick Aloy (Bioinform., 2015)

Systems-Wide Prediction of Enzyme Promiscuity Reveals a New Underground Alternative Route for Pyridoxal 5'-Phosphate Production in E. coli. - Matthew A. Oberhardt; Raphy Zarecki; Leah Reshef; Fangfang Xia; Miquel Duran-Frigola; Rachel Schreiber; Christopher S. Henry; Nir Ben-Tal; Daniel J. Dwyer; Uri Gophna; Eytan Ruppin (PLoS Comput. Biol., 2016)

A PanorOmic view of personal cancer genomes. - Lidia Mateo; Oriol Guitart-Pla; Carles Pons; Miquel Duran-Frigola; Roberto Mosca 002; Patrick Aloy (Nucleic Acids Res., 2017)

Detecting similar binding pockets to enable systems polypharmacology. - Miquel Duran-Frigola; Lydia Siragusa; Eytan Ruppin; Xavier Barril; Gabriele Cruciani; Patrick Aloy (PLoS Comput. Biol., 2017)

Bioactivity Profile Similarities to Expand the Repertoire of COVID-19 Drugs. - Miquel Duran-Frigola; Martino Bertoni; Roi Blanco; Víctor Martínez; Eduardo Pauls; Víctor Alcalde; Gemma Turon; Núria Villegas; Adrià Fernández-Torras; Carles Pons; Lidia Mateo; Oriol Guitart-Pla; et al. (J. Chem. Inf. Model., 2020)

A reference map of the human binary protein interactome. - Katja Luck; Dae-Kyum Kim; Luke Lambourne; Kerstin Spirohn; Bridget E. Begg; Wenting Bian; Ruth Brignall; Tiziana Cafarelli; Francisco J. Campos-Laborie; Benoît Charloteaux; Dong-Sic Choi; Atina G. Coté; et al. (Nat., 2020)

Computational Applications in Secondary Metabolite Discovery (CAiSMD): an online workshop. - Fidele Ntie-Kang; Kiran K. Telukunta; Serge A. T. Fobofou; Victor Chukwudi Osamor; Samuel A. Egieyeh; Marilia Valli; Yannick Djoumbou Feunang; Maria Sorokina; Conrad Stork; Neann Mathai; Paul F. Zierep; Ana L. Chávez-Hernández; et al. (J. Cheminformatics, 2021)

Chemoinformatics and artificial intelligence colloquium: progress and challenges in developing bioactive compounds. - Jürgen Bajorath; Ana L. Chávez-Hernández; Miquel Duran-Frigola; Eli Fernández-de Gortari; Johann Gasteiger; Edgar López-López; Gerald M. Maggiora; José L. Medina-Franco; Oscar Méndez-Lucio; Jordi Mestres; Ramón Alain Miranda-Quintana; Tudor I. Oprea; et al. (J. Cheminformatics, 2022)