A molecular fragment cheminformatics roadmap for mesoscopic simulation. - Andreas Truszkowski; Mirco Daniel; Hubert Kuhn; Stefan Neumann 001; Christoph Steinbeck; Achim Zielesny; Matthias Epple (J. Cheminformatics, 2014)

SPICES: a particle-based molecular structure line notation and support library for mesoscopic simulation. - Karina van den Broek; Mirco Daniel; Matthias Epple; Hubert Kuhn; Jonas Schaub; Achim Zielesny (J. Cheminformatics, 2018)

MFsim - an open Java all-in-one rich-client simulation environment for mesoscopic simulation. - Karina van den Broek; Mirco Daniel; Matthias Epple; Jan-Mathis Hein; Hubert Kuhn; Stefan Neumann 001; Andreas Truszkowski; Achim Zielesny (J. Cheminformatics, 2020)

An automated calculation pipeline for differential pair interaction energies with molecular force fields using the Tinker Molecular Modeling Package. - Felix Bänsch; Mirco Daniel; Harald Lanig; Christoph Steinbeck; Achim Zielesny (J. Cheminformatics, 2024)