Apprentissage de signatures de facteurs de transcription à partir de données d'expression. - Mohamed Elati; Céline Rouveirol; François Radvanyi (EGC, 2005)

LICORN: learning cooperative regulation networks from gene expression data. - Mohamed Elati; Pierre Neuvial; Monique Bolotin-Fukuhara; Emmanuel Barillot; François Radvanyi; Céline Rouveirol (Bioinform., 2007)

Fouille de données pour l'extraction de grands réseaux de régulation génétique. - Mohamed Elati; François Radvanyi; Céline Rouveirol (Tech. Sci. Informatiques, 2007)

Recherche adaptative de structures de régulation génétique. - Mohamed Elati; Céline Rouveirol (EGC, 2008)

Boosting Binding Sites Prediction Using Gene's Positions. - Mohamed Elati; Rim Fekih; Rémy Nicolle; Ivan Junier; Joan Hérisson; François Képès (WABI, 2011)

Network Transformation of Gene Expression for Feature Extraction. - Rémy Nicolle; Mohamed Elati; François Radvanyi (ICMLA (1), 2012)

Hybrid method inference for the construction of cooperative regulatory network in human. - I. Chebil; Rémy Nicolle; G. Santini; Céline Rouveirol; Mohamed Elati (BIBM, 2013)

A parallel genetic programming for single class classification. - Cuong To; Mohamed Elati (GECCO (Companion), 2013)

SetNet: Ensemble Method Techniques for Learning Regulatory Networks. - I. Chebil; Mohamed Elati; Céline Rouveirol; G. Santini (ICMLA (1), 2013)

Multi-Objective Optimization for Relevant Sub-graph Extraction. - Mohamed Elati; Cuong To; Rémy Nicolle (LION, 2013)

Pepper: cytoscape app for protein complex expansion using protein-protein interaction networks. - Charles Winterhalter; Rémy Nicolle; A. Louis; Cuong To; François Radvanyi; Mohamed Elati (Bioinform., 2014)

CoRegNet: reconstruction and integrated analysis of co-regulatory networks. - Rémy Nicolle; François Radvanyi; Mohamed Elati (Bioinform., 2015)

Inference, Interrogation and Implementation of Biological Networks. - Mohamed Elati (2016)

A Bayesian approach to construct Context-Specific Gene Ontology: Application to protein function prediction. - Hasna Njah; Salma Jamoussi; Walid Mahdi; Mohamed Elati (CIBCB, 2016)

Analysis tools for the interplay between genome layout and regulation. - Costas Bouyioukos; Mohamed Elati; François Képès (BMC Bioinform., 2016)

GREAT: a web portal for Genome Regulatory Architecture Tools. - Costas Bouyioukos; François Bucchini; Mohamed Elati; François Képès (Nucleic Acids Res., 2016)

An evolutionary schema for mining skyline clusters of attributed graph data. - Wajdi Dhifli; Noemie Oliveira Da Costa; Mohamed Elati (CEC, 2017)

Integrating transcriptional activity in genome-scale models of metabolism. - Daniel Trejo-Baños; Pauline Trébulle; Mohamed Elati (BMC Syst. Biol., 2017)

Evolutionary optimization of convolutional neural networks for cancer miRNA biomarkers classification. - Alejandro Lopez Rincon; Alberto Paolo Tonda; Mohamed Elati; Olivier Schwander; Benjamin Piwowarski; Patrick Gallinari (Appl. Soft Comput., 2018)

Latent network-based representations for large-scale gene expression data analysis. - Wajdi Dhifli; Júlia Puig; Aurélien Dispot; Mohamed Elati (BMC Bioinform., 2019)

Instance Matching in Knowledge Graphs Through Dynamic, Distributed and Affinity-Preserving Random Walk. - Ali Assi 002; Mohamed Elati; Wajdi Dhifli (IEEE BigData, 2020)

Evolutionary mining of skyline clusters of attributed graph data. - Wajdi Dhifli; Nour El Islem Karabadji; Mohamed Elati (Inf. Sci., 2020)

Identification of deregulation mechanisms specific to cancer subtypes. - Magali Champion; Julien Chiquet; Pierre Neuvial; Mohamed Elati; François Radvanyi; Etienne Birmelé (J. Bioinform. Comput. Biol., 2021)

Optimizing MLP Network Structure for Classification Problems Using PSO and Dominating Vertex Set. - Ines Hadjadji; Nour El Islem Karabadji; Hassina Seridi; Naouel Manaa; Mohamed Elati; Wajdi Dhifli (ICDM (Workshops), 2024)