Meta-aligner: long-read alignment based on genome statistics. - Damoon Nashta-ali; Ali Aliyari; Ahmad Ahmadian Moghadam; Mohammad Amin Edrisi; Abolfazl Seyed Motahari; Babak Hossein Khalaj (BMC Bioinform., 2017)

A Combinatorial Approach for Single-cell Variant Detection via Phylogenetic Inference. - Mohammad Amin Edrisi; Hamim Zafar; Luay Nakhleh (WABI, 2019)

Towards Cognitive Recommender Systems. - Amin Beheshti; Shahpar Yakhchi; Salman Mousaeirad; Seyed Mohssen Ghafari; Srinivasa Reddy Goluguri; Mohammad Amin Edrisi (Algorithms, 2020)

Assessing the performance of methods for copy number aberration detection from single-cell DNA sequencing data. - Xian F. Mallory; Mohammad Amin Edrisi; Nicholas Navin; Luay Nakhleh (PLoS Comput. Biol., 2020)

Towards Dynamic Feature Selection with Attention to Assist Banking Customers in Establishing a New Business. - Mohammad Amin Edrisi (CoRR, 2021)

Phylovar: toward scalable phylogeny-aware inference of single-nucleotide variations from single-cell DNA sequencing data. - Mohammad Amin Edrisi; Monica V. Valecha; Sunkara B. V. Chowdary; Sergio Robledo; Huw A. Ogilvie; David Posada; Hamim Zafar; Luay Nakhleh (Bioinform., 2022)

MoTERNN: Classifying the Mode of Cancer Evolution Using Recursive Neural Networks. - Mohammad Amin Edrisi; Huw A. Ogilvie; Meng Li 002; Luay Nakhleh (RECOMB-CG, 2023)

NestedBD: Bayesian inference of phylogenetic trees from single-cell copy number profiles under a birth-death model. - Yushu Liu; Mohammad Amin Edrisi; Zhi Yan 008; Huw A. Ogilvie; Luay Nakhleh (Algorithms Mol. Biol., 2024)