Degree restricted spanning trees of graphs. - Mohammad Sohel Rahman; Mohammod Abul Kashem (SAC, 2004)

Optimal Server Selection for Content Routing. - Md. Mostofa Akbar; Eric G. Manning; Gholamali C. Shoja; Mohammad Sohel Rahman; Mohammad Kaykobad (CATA, 2005)

A New Sufficient Condition for the Existence of Hamiltonian Paths. - Mohammad Sohel Rahman; Mohammad Kaykobad; Mohammad Saifur Rahman 001 (CATA, 2005)

On Communicating with Agents on the Network. - Rajat Shuvro Roy; Mohammad Sohel Rahman (ICDCIT, 2005)

On Hamiltonian cycles and Hamiltonian paths. - Mohammad Sohel Rahman; Mohammad Kaykobad (Inf. Process. Lett., 2005)

Complexities of some interesting problems on spanning trees. - Mohammad Sohel Rahman; Mohammad Kaykobad (Inf. Process. Lett., 2005)

Finding Patterns with Variable Length Gaps or Don't Cares. - M. Sohel Rahman; Costas S. Iliopoulos; Inbok Lee; Manal Mohamed 001; William F. Smyth (COCOON, 2006)

Song classifications for dancing. - Manolis Christodoulakis; Costas S. Iliopoulos; Mohammad Sohel Rahman; William F. Smyth (Stringology, 2006)

Solving the Multidimensional Multiple-choice Knapsack Problem by constructing convex hulls. - Md. Mostofa Akbar; Mohammad Sohel Rahman; Mohammad Kaykobad; Eric G. Manning; Gholamali C. Shoja (Comput. Oper. Res., 2006)

Algorithms for Computing the Longest Parameterized Common Subsequence. - Costas S. Iliopoulos; Marcin Kubica 001; M. Sohel Rahman; Tomasz Walen (CPM, 2007)

Finding Patterns in Given Intervals. - Maxime Crochemore; Costas S. Iliopoulos; M. Sohel Rahman (MFCS, 2007)

Pattern Matching Algorithms with Don't Cares. - M. Sohel Rahman; Costas S. Iliopoulos (SOFSEM (2), 2007)

Pattern Matching in Degenerate DNA/RNA Sequences. - M. Sohel Rahman; Costas S. Iliopoulos; Laurent Mouchard (WALCOM, 2007)

The Constrained Longest Common Subsequence Problem for Degenerate Strings. - Costas S. Iliopoulos; M. Sohel Rahman; Michal Vorácek; Ladislav Vagner (CIAA, 2007)

Fast and efficient algorithms on strings and sequences. - Mohammad Sohel Rahman (2007)

Implementation of a Swap Matching Algorithm Using a Graph Theoretic Model. - Pavlos Antoniou; Costas S. Iliopoulos; Inuka Jayasekera; M. Sohel Rahman (BIRD, 2008)

Indexing Factors in DNA/RNA Sequences. - Tomás Flouri; Costas S. Iliopoulos; Mohammad Sohel Rahman; Ladislav Vagner; Michal Vorácek (BIRD, 2008)

A New Model to Solve the Swap Matching Problem and Efficient Algorithms for Short Patterns. - Costas S. Iliopoulos; M. Sohel Rahman (SOFSEM, 2008)

Improved Algorithms for the Range Next Value Problem and Applications. - Maxime Crochemore; Costas S. Iliopoulos; Marcin Kubica 001; Mohammad Sohel Rahman; Tomasz Walen (STACS, 2008)

Indexing Circular Patterns. - Costas S. Iliopoulos; M. Sohel Rahman (WALCOM, 2008)

Identifying Rhythms in Musical Texts. - Manolis Christodoulakis; Costas S. Iliopoulos; Mohammad Sohel Rahman; William F. Smyth (Int. J. Found. Comput. Sci., 2008)

Optimal prefix and suffix queries on texts. - Maxime Crochemore; Costas S. Iliopoulos; Mohammad Sohel Rahman (Inf. Process. Lett., 2008)

Faster index for property matching. - Costas S. Iliopoulos; Mohammad Sohel Rahman (Inf. Process. Lett., 2008)

New efficient algorithms for the LCS and constrained LCS problems. - Costas S. Iliopoulos; Mohammad Sohel Rahman (Inf. Process. Lett., 2008)

A New Approach to Pattern Matching in Degenerate DNA/RNA Sequences and Distributed Pattern Matching. - Costas S. Iliopoulos; Laurent Mouchard; Mohammad Sohel Rahman (Math. Comput. Sci., 2008)

Algorithms for computing variants of the longest common subsequence problem. - Costas S. Iliopoulos; M. Sohel Rahman (Theor. Comput. Sci., 2008)

A multiprocessor based heuristic for multi-dimensional multiple-choice knapsack problem. - Abu Zafar M. Shahriar; Md. Mostofa Akbar; Mohammad Sohel Rahman; Muhammad Abdul Hakim Newton (J. Supercomput., 2008)

An Optical Solution for the Subset Sum Problem. - Masud Hasan; S. M. Shabab Hossain; Md. Mahmudur Rahman; M. Sohel Rahman (IWNC, 2009)

Computing a Solution for the Subset Sum Problem with a Light Based Device. - Md. Raqibul Hasan; M. Sohel Rahman (OSC, 2009)

Finding All Covers of an Indeterminate String in O(n) Time on Average. - Md. Faizul Bari; Mohammad Sohel Rahman; Rifat Shahriyar (Stringology, 2009)

Maximum Neighbour Voronoi Games. - Md. Muhibur Rasheed; Masud Hasan; M. Sohel Rahman (WALCOM, 2009)

Indexing Factors with Gaps. - Costas S. Iliopoulos; M. Sohel Rahman (Algorithmica, 2009)

The 1.375 Approximation Algorithm for Sorting by Transpositions Can Run in $O(n log n)$ Time - Jesun Sahariar Firoz; Masud Hasan; Ashik Zinnat Khan; M. Sohel Rahman (CoRR, 2009)

A New Efficient Algorithm for Computing the Longest Common Subsequence. - Costas S. Iliopoulos; Mohammad Sohel Rahman (Theory Comput. Syst., 2009)

Solving the Multi-dimensional Multi-choice Knapsack Problem with the Help of Ants. - Shahrear Iqbal; Md. Faizul Bari; M. Sohel Rahman (ANTS Conference, 2010)

Solving a Generalized Version of the Exact Cover Problem with a Light-Based Device. - S. M. Shabab Hossain; Md. Mahmudur Rahman; M. Sohel Rahman (OSC, 2010)

Finite Automata Based Algorithms for the Generalized Constrained Longest Common Subsequence Problems. - Effat Farhana; Jannatul Ferdous; Tanaeem M. Moosa; M. Sohel Rahman (SPIRE, 2010)

Pancake Flipping with Two Spatulas. - Mahfuza Sharmin; Rukhsana Yeasmin; Masud Hasan; Atif Rahman 001; Mohammad Sohel Rahman (Electron. Notes Discret. Math., 2010)

Finding Patterns In Given Intervals. - Maxime Crochemore; Marcin Kubica 001; Tomasz Walen; Costas S. Iliopoulos; M. Sohel Rahman (Fundam. Informaticae, 2010)

Indexing permutations for binary strings. - Tanaeem M. Moosa; M. Sohel Rahman (Inf. Process. Lett., 2010)

Finite automata based algorithms on subsequences and supersequences of degenerate strings. - Costas S. Iliopoulos; M. Sohel Rahman; Michal Vorácek; Ladislav Vagner (J. Discrete Algorithms, 2010)

Cache Oblivious Algorithms for the RMQ and the RMSQ Problems. - Masud Hasan; Tanaeem M. Moosa; M. Sohel Rahman (Math. Comput. Sci., 2010)

Linear Time Inference of Strings from Cover Arrays using a Binary Alphabet - Tanaeem M. Moosa; Sumaiya Nazeen; M. Sohel Rahman; Rezwana Reaz (CoRR, 2011)

Solving Minimum Hitting Set Problem and Generalized Exact Cover Problem with Light Based Devices. - Masud Hasan; S. M. Shabab Hossain; Md. Mahmudur Rahman; M. Sohel Rahman (Int. J. Unconv. Comput., 2011)

The 1.375 Approximation Algorithm for Sorting by Transpositions Can Run in O(n log n) Time. - Jesun Sahariar Firoz; Masud Hasan; Ashik Zinnat Khan; M. Sohel Rahman (J. Comput. Biol., 2011)

Solving the generalized Subset Sum problem with a light based device. - Masud Hasan; S. M. Shabab Hossain; Md. Mahmudur Rahman; M. Sohel Rahman (Nat. Comput., 2011)

Placement of unique restriction sites in synthetic genomes using multi-objective optimization. - Mahfuza Sharmin; M. Sohel Rahman (BIBM, 2012)

Bee algorithms for solving DNA fragment assembly problem with noisy and noiseless data. - Jesun Sahariar Firoz; M. Sohel Rahman; Tanay Kumar Saha (GECCO, 2012)

Linear Time Inference of Strings from Cover Arrays Using a Binary Alphabet - (Extended Abstract). - Tanaeem M. Moosa; Sumaiya Nazeen; M. Sohel Rahman; Rezwana Reaz (WALCOM, 2012)

Improved Algorithms for the Point-Set Embeddability Problem for Plane 3-Trees. - Tanaeem M. Moosa; M. Sohel Rahman (Discret. Math. Algorithms Appl., 2012)

Doubly-Constrained LCS and Hybrid-Constrained LCS problems revisited. - Effat Farhana; M. Sohel Rahman (Inf. Process. Lett., 2012)

The substring inclusion constraint longest common subsequence problem can be solved in quadratic time. - Muhammad Rashed Alam; M. Sohel Rahman (J. Discrete Algorithms, 2012)

Sub-quadratic time and linear space data structures for permutation matching in binary strings. - Tanaeem M. Moosa; M. Sohel Rahman (J. Discrete Algorithms, 2012)

Indeterminate string inference algorithms. - Sumaiya Nazeen; M. Sohel Rahman; Rezwana Reaz (J. Discrete Algorithms, 2012)

Exact and approximate rhythm matching algorithms. - Joseph Wun-Tat Chan; Costas S. Iliopoulos; Spiros Michalakopoulos; M. Sohel Rahman (Int. J. Digit. Libr., 2012)

Improved algorithms for the range next value problem and applications. - Maxime Crochemore; Costas S. Iliopoulos; Marcin Kubica 001; M. Sohel Rahman; German Tischler; Tomasz Walen (Theor. Comput. Sci., 2012)

Protein Folding in 2D-Triangular Lattice Revisited - (Extended Abstract). - A. S. M. Shohidull Islam; M. Sohel Rahman (IWOCA, 2013)

Maximal Palindromic Factorization. - Ali Alatabbi; Costas S. Iliopoulos; Mohammad Sohel Rahman (Stringology, 2013)

Degenerate String Reconstruction from Cover Arrays. - Dipankar Ranjan Baisya; Mir Md. Faysal; Mohammad Sohel Rahman (Stringology, 2013)

An Improved Intelligent Water Drop Algorithm for a Real-Life Waste Collection Problem. - Mohammad Raihanul Islam; M. Sohel Rahman (ICSI (2), 2013)

On Palindromic Sequence Automata and Applications. - Md. Mahbubul Hasan; A. S. M. Sohidull Islam; M. Sohel Rahman; Ayon Sen (CIAA, 2013)

On the protein folding problem in 2D-triangular lattices. - A. S. M. Sohidull Islam; Mohammad Sohel Rahman (Algorithms Mol. Biol., 2013)

Inferring Strings from Cover Arrays. - Tanaeem M. Moosa; Sumaiya Nazeen; M. Sohel Rahman; Rezwana Reaz (Discret. Math. Algorithms Appl., 2013)

Bipartite Graphs, Hamiltonicity and Z graphs. - M. Sohel Rahman; M. Kaykobad; Md. Tanvir Kaykobad (Electron. Notes Discret. Math., 2013)

A divide and conquer approach and a work-optimal parallel algorithm for the LIS problem. - Muhammad Rashed Alam; M. Sohel Rahman (Inf. Process. Lett., 2013)

Prefix transpositions on binary and ternary strings. - Amit Kumar Dutta; Masud Hasan; M. Sohel Rahman (Inf. Process. Lett., 2013)

Improving the Performance of a Genome Sorting Algorithm with Inverted Block-Interchange. - Deen Mohammad Abdullah; Wali Md Abdullah; M. Sohel Rahman (J. Comput., 2013)

A graph-theoretic model to solve the approximate string matching problem allowing for translocations. - Pritom Ahmed; A. S. M. Shohidull Islam; M. Sohel Rahman (J. Discrete Algorithms, 2013)

Computing a longest common subsequence that is almost increasing on sequences having no repeated elements. - Johra Muhammad Moosa; M. Sohel Rahman; Fatema Tuz Zohora (J. Discrete Algorithms, 2013)

A fast and lightweight filter-based algorithm for circular pattern matching. - Md. Aashikur Rahman Azim; Costas S. Iliopoulos; Mohammad Sohel Rahman; M. Samiruzzaman (BCB, 2014)

GreMuTRRR: A novel genetic algorithm to solve distance geometry problem for protein structures. - Md. Lisul Islam; Swakkhar Shatabda; Mohammad Sohel Rahman (BIBM, 2014)

Application of Consensus String Matching in the Diagnosis of Allelic Heterogeneity - (Extended Abstract). - Fatema Tuz Zohora; M. Sohel Rahman (ISBRA, 2014)

Order Preserving Prefix Tables. - Md. Mahbubul Hasan; A. S. M. Sohidull Islam; Mohammad Saifur Rahman 001; M. Sohel Rahman (SPIRE, 2014)

Simple Linear Comparison of Strings in V-Order - (Extended Abstract). - Ali Alatabbi; Jacqueline W. Daykin; M. Sohel Rahman; William F. Smyth (WALCOM, 2014)

Protein folding in HP model on hexagonal lattices with diagonals. - Dipan Lal Shaw; A. S. M. Shohidull Islam; M. Sohel Rahman; Masud Hasan (BMC Bioinform., 2014)

A MAX-MIN Ant Colony System for Minimum Common String Partition Problem. - S. M. Ferdous; M. Sohel Rahman (CoRR, 2014)

An Integer Programming Formulation of the Minimum Common String Partition problem. - S. M. Ferdous; M. Sohel Rahman (CoRR, 2014)

CoMOGrad and PHOG: From Computer Vision to Fast and Accurate Protein Tertiary Structure Retrieval. - Rezaul Karim; Mohd. Momin Al Aziz; Swakkhar Shatabda; M. Sohel Rahman; Md. Abul Kashem Mia; Farhana Zaman; Salman Rakin (CoRR, 2014)

Protein Folding in the Hexagonal Prism Lattice with Diagonals. - Dipan Lal Shaw; M. Sohel Rahman; A. S. M. Sohidull Islam; Shuvasish Karmaker (CoRR, 2014)

Computing a Longest Common Palindromic Subsequence. - Shihabur Rahman Chowdhury; Md. Mahbubul Hasan; Sumaiya Iqbal; M. Sohel Rahman (Fundam. Informaticae, 2014)

Longest Common Subsequence Problem for Run-Length-Encoded Strings. - Shegufta Bakht Ahsan; Syeda Persia Aziz; M. Sohel Rahman (J. Comput., 2014)

Effective Sparse Dynamic Programming Algorithms for Merged and Block Merged LCS Problems. - A. H. M. Mahfuzur Rahman; M. Sohel Rahman (J. Comput., 2014)

A CLONALG-based Approach for the Set Covering Problem. - Masruba Tasnim; Shahriar Rouf; M. Sohel Rahman (J. Comput., 2014)

The swap matching problem revisited. - Pritom Ahmed; Costas S. Iliopoulos; A. S. M. Sohidull Islam; Mohammad Sohel Rahman (Theor. Comput. Sci., 2014)

A Filter-Based Approach for Approximate Circular Pattern Matching. - Md. Aashikur Rahman Azim; Costas S. Iliopoulos; M. Sohel Rahman; M. Samiruzzaman (ISBRA, 2015)

New Heuristics for Clustering Large Biological Networks. - Md. Kishwar Shafin; Kazi Lutful Kabir; Iffatur Ridwan; Tasmiah Tamzid Anannya; Rashid Saadman Karim; Mohammad Mozammel Hoque; M. Sohel Rahman (ISBRA, 2015)

SimpLiSMS: A Simple, Lightweight and Fast Approach for Structured Motifs Searching. - Ali Alatabbi; Shuhana Azmin; Md. Kawser Habib; Costas S. Iliopoulos; M. Sohel Rahman (IWBBIO (2), 2015)

A metaheuristic approach for application partitioning in mobile system. - S. M. Ferdous; M. Sohel Rahman (NSysS, 2015)

FGPGA: An efficient genetic approach for producing feasible graph partitions. - Md. Lisul Islam; Novia Nurain; Swakkhar Shatabda; M. Sohel Rahman (NSysS, 2015)

Impact of heuristics in clustering large biological networks. - Md. Kishwar Shafin; Kazi Lutful Kabir; Iffatur Ridwan; Tasmiah Tamzid Anannya; Rashid Saadman Karim; Mohammad Mozammel Hoque; M. Sohel Rahman (Comput. Biol. Chem., 2015)

Linear Algorithms for Computing the Lyndon Border Array and the Lyndon Suffix Array. - Ali Alatabbi; Jacqueline W. Daykin; M. Sohel Rahman (CoRR, 2015)

String Comparison in V-Order: New Lexicographic Properties & On-line Applications. - Ali Alatabbi; Jacqueline W. Daykin; Mohammad Sohel Rahman; William F. Smyth (CoRR, 2015)

Enhanced Covers of Regular & Indeterminate Strings using Prefix Tables. - Ali Alatabbi; A. S. M. Sohidull Islam; Mohammad Sohel Rahman; Jamie Simpson; William F. Smyth (CoRR, 2015)

Simple Linear Comparison of Strings in V-order. - Ali Alatabbi; Jacqueline W. Daykin; Mohammad Sohel Rahman; William F. Smyth (Fundam. Informaticae, 2015)

Application of consensus string matching in the diagnosis of allelic heterogeneity involving transposition mutation. - Fatema Tuz Zohora; M. Sohel Rahman (Int. J. Data Min. Bioinform., 2015)

Constrained sequence analysis algorithms in computational biology. - Effat Farhana; M. Sohel Rahman (Inf. Sci., 2015)

Inferring an indeterminate string from a prefix graph. - Ali Alatabbi; M. Sohel Rahman; William F. Smyth (J. Discrete Algorithms, 2015)

Pancake flipping and sorting permutations. - Masud Hasan; Atif Rahman 001; Md. Khaledur Rahman; Mohammad Sohel Rahman; Mahfuza Sharmin; Rukhsana Yeasmin (J. Discrete Algorithms, 2015)

Prefix and suffix transreversals on binary and ternary strings. - Md. Khaledur Rahman; M. Sohel Rahman (J. Discrete Algorithms, 2015)

Order preserving pattern matching revisited. - Md. Mahbubul Hasan; A. S. M. Shohidull Islam; Mohammad Saifur Rahman 001; Mohammad Sohel Rahman (Pattern Recognit. Lett., 2015)

Solving the multi-objective Vehicle Routing Problem with Soft Time Windows with the help of bees. - Sumaiya Iqbal; M. Kaykobad; M. Sohel Rahman (Swarm Evol. Comput., 2015)

Using adaptive heartbeat rate on long-lived TCP connections. - Mohammad Saifur Rahman 001; Yusuf Sarwar Uddin; M. Sohel Rahman; M. Kaykobad (NSysS, 2016)

Algorithms to Compute the Lyndon Array. - Frantisek Franek; A. S. M. Sohidull Islam; Mohammad Sohel Rahman; William F. Smyth (Stringology, 2016)

Mapping stream programs onto multicore platforms by local search and genetic algorithm. - S. M. Farhad; Muhammad Ali Nayeem; Md. Khaledur Rahman; M. Sohel Rahman (Comput. Lang. Syst. Struct., 2016)

A novel and effective scoring scheme for structure classification and pairwise similarity measurement. - Rezaul Karim; Mohd. Momin Al Aziz; Swakkhar Shatabda; Mohammad Sohel Rahman (CoRR, 2016)

V-Order: New combinatorial properties & a simple comparison algorithm. - Ali Alatabbi; Jacqueline W. Daykin; Juha Kärkkäinen; M. Sohel Rahman; W. F. Smyth (Discret. Appl. Math., 2016)

Computing covers using prefix tables. - Ali Alatabbi; M. Sohel Rahman; W. F. Smyth (Discret. Appl. Math., 2016)

Algorithms for Longest Common Abelian Factors. - Ali Alatabbi; Costas S. Iliopoulos; Alessio Langiu; M. Sohel Rahman (Int. J. Found. Comput. Sci., 2016)

Enhanced Covers of Regular and Indeterminate Strings Using Prefix Tables. - Ali Alatabbi; Abu Sayed Md. Sohidull Islam; Mohammad Sohel Rahman; Jamie Simpson; W. F. Smyth (J. Autom. Lang. Comb., 2016)

Special issue on WALCOM 2015. - M. Sohel Rahman; Etsuji Tomita (J. Discrete Algorithms, 2016)

Guest Editors' Foreword. - M. Sohel Rahman; Etsuji Tomita (J. Graph Algorithms Appl., 2016)

An efficient algorithm to detect common ancestor genes for non-overlapping inversion and applications. - Fatema Tuz Zohora; M. Sohel Rahman (Theor. Comput. Sci., 2016)

Searching and Indexing Circular Patterns. - Costas S. Iliopoulos; Solon P. Pissis; M. Sohel Rahman (Algorithms for Next-Generation Sequencing Data, 2017)

Salty Secret: Let us secretly salt the secret. - E. M. Wasifur Rahman Chowdhury; Mohammad Saifur Rahman 001; A. B. M. Alim Al Islam; M. Sohel Rahman (NSysS, 2017)

iDTI-ESBoost: Identification of Drug Target Interaction Using Evolutionary and Structural Features with Boosting. - Farshid Rayhan; Sajid Ahmed; Swakkhar Shatabda; Dewan Md. Farid; Zaynab Mousavian; Abdollah Dehzangi; M. Sohel Rahman (CoRR, 2017)

Solving the Minimum Common String Partition Problem with the Help of Ants. - S. M. Ferdous; M. Sohel Rahman (Math. Comput. Sci., 2017)

Palindromic Subsequence Automata and Longest Common Palindromic Subsequence. - Md. Mahbubul Hasan; A. S. M. Sohidull Islam; M. Sohel Rahman; Ayon Sen (Math. Comput. Sci., 2017)

A Faster V-order String Comparison Algorithm. - Ali Alatabbi; Jacqueline W. Daykin; Mhaskar Neerja; Mohammad Sohel Rahman; William F. Smyth (Stringology, 2018)

A Simple, Fast, Filter-Based Algorithm for Circular Sequence Comparison. - Md. Aashikur Rahman Azim; Mohimenul Kabir; M. Sohel Rahman (WALCOM, 2018)

On Multiple Longest Common Subsequence and Common Motifs with Gaps (Extended Abstract). - Suri Dipannita Sayeed; M. Sohel Rahman; Atif Rahman 001 (WALCOM, 2018)

isGPT: An optimized model to identify sub-Golgi protein types using SVM and Random Forest based feature selection. - Mohammad Saifur Rahman 001; Md. Khaledur Rahman; M. Kaykobad; M. Sohel Rahman (Artif. Intell. Medicine, 2018)

Multidimensional segment trees can do range queries and updates in logarithmic time. - Nabil Ibtehaz; M. Kaykobad; M. Sohel Rahman (CoRR, 2018)

Deep Face Image Retrieval: a Comparative Study with Dictionary Learning. - Ahmad S. Tarawneh; Ahmad B. A. Hassanat; Ceyhun Celik; Dmitry Chetverikov; M. Sohel Rahman; Chaman Verma (CoRR, 2018)

Approximation Algorithms for Three Dimensional Protein Folding. - Dipan Lal Shaw; A. S. M. Shohidull Islam; Shuvasish Karmaker; M. Sohel Rahman (Fundam. Informaticae, 2018)

An ensemble learning based approach for impression fraud detection in mobile advertising. - Ch. Md. Rakin Haider; Anindya Iqbal; Atif Hasan Rahman 001; M. Sohel Rahman (J. Netw. Comput. Appl., 2018)

Using Adaptive Heartbeat Rate on Long-Lived TCP Connections. - Mohammad Saifur Rahman 001; Mohammad Yusuf Sarwar Uddin; Tahmid Hasan; M. Sohel Rahman; M. Kaykobad (IEEE/ACM Trans. Netw., 2018)

A 'phylogeny-aware' multi-objective optimization approach for computing MSA. - Muhammad Ali Nayeem; Md. Shamsuzzoha Bayzid; Atif Hasan Rahman 001; Rifat Shahriyar; M. Sohel Rahman (GECCO, 2019)

Automatic Summarization of Scientific Articles from Biomedical Domain. - Md. Kaykobad Reza; Rifat Rubayatul Islam; Sadik Siddique; Md. Mostofa Akbar; M. Sohel Rahman (IJCCI, 2019)

Applications of V-Order: Suffix Arrays, the Burrows-Wheeler Transform & the FM-index. - Ali Alatabbi; Jacqueline W. Daykin; Neerja Mhaskar; M. Sohel Rahman; W. F. Smyth (WALCOM, 2019)

A Linear Time Algorithm for the r-Gathering Problem on the Line (Extended Abstract). - Anik Sarker; Wing-Kin Sung; M. Sohel Rahman (WALCOM, 2019)

Antigenic: An improved prediction model of protective antigens. - Mohammad Saifur Rahman 001; Md. Khaledur Rahman; Sanjay Saha; M. Kaykobad; M. Sohel Rahman (Artif. Intell. Medicine, 2019)

VFPred: A fusion of signal processing and machine learning techniques in detecting ventricular fibrillation from ECG signals. - Nabil Ibtehaz; Mohammad Saifur Rahman 001; M. Sohel Rahman (Biomed. Signal Process. Control., 2019)

Protein structure prediction from inaccurate and sparse NMR data using an enhanced genetic algorithm. - Md. Lisul Islam; Swakkhar Shatabda; Mahmood A. Rashid; M. G. M. Khan 001; M. Sohel Rahman (Comput. Biol. Chem., 2019)

Prefix Block-Interchanges on Binary and Ternary Strings. - Md. Khaledur Rahman; M. Sohel Rahman (CoRR, 2019)

Improving Malaria Parasite Detection from Red Blood Cell using Deep Convolutional Neural Networks. - Aimon Rahman; Hasib Zunair; M. Sohel Rahman; Jesia Quader Yuki; Sabyasachi Biswas; Md. Ashraful Alam; Nabila Binte Alam; M. R. C. Mahdy (CoRR, 2019)

Guest Editors' Foreword. - M. Sohel Rahman; Wing-Kin Sung; Ryuhei Uehara (J. Graph Algorithms Appl., 2019)

A heuristic aided Stochastic Beam Search algorithm for solving the transit network design problem. - Kazi Ashik Islam; Ibraheem Muhammad Moosa; Jaiaid Mobin; Muhammad Ali Nayeem; M. Sohel Rahman (Swarm Evol. Comput., 2019)

A Multi-objective Metaheuristic Approach for Accurate Species Tree Estimation. - Muhammad Ali Nayeem; Md. Shamsuzzoha Bayzid; Sakshar Chakravarty; Mohammad Saifur Rahman 001; M. Sohel Rahman (BIBE, 2020)

Not Low-Resource Anymore: Aligner Ensembling, Batch Filtering, and New Datasets for Bengali-English Machine Translation. - Tahmid Hasan; Abhik Bhattacharjee; Kazi Samin; Masum Hasan; Madhusudan Basak; M. Sohel Rahman; Rifat Shahriyar (EMNLP (1), 2020)

Agree-to-Disagree (A2D): A Deep Learning-Based Framework for Authorship Discrimination Task in Corpus-Specificity Free Manner. - Md. Tawkat Islam Khondaker; Junaed Younus Khan; Tanvir Alam; M. Sohel Rahman (IEEE Access, 2020)

CRISPRpred(SEQ): a sequence-based method for sgRNA on target activity prediction using traditional machine learning. - Ali Haisam Muhammad Rafid; Md. Toufikuzzaman; Mohammad Saifur Rahman 001; M. Sohel Rahman (BMC Bioinform., 2020)

PPG2ABP: Translating Photoplethysmogram (PPG) Signals to Arterial Blood Pressure (ABP) Waveforms using Fully Convolutional Neural Networks. - Nabil Ibtehaz; M. Sohel Rahman (CoRR, 2020)

COVID-19Base: A knowledgebase to explore biomedical entities related to COVID-19. - Junaed Younus Khan; Md. Tawkat Islam Khondaker; Iram Tazim Hoque; Hamada R. H. Al-Absi; Mohammad Saifur Rahman 001; Tanvir Alam; M. Sohel Rahman (CoRR, 2020)

Align-gram : Rethinking the Skip-gram Model for Protein Sequence Analysis. - Nabil Ibtehaz; S. M. Shakhawat Hossain Sourav; Md. Shamsuzzoha Bayzid; M. Sohel Rahman (CoRR, 2020)

MISCAST: MIssense variant to protein StruCture Analysis web SuiTe. - Sumaiya Iqbal; David Hoksza; Eduardo Pérez-Palma; Patrick May; Jakob B. Jespersen; Shehab S. Ahmed; Zaara T. Rifat; Henrike O. Heyne; Mohammad Sohel Rahman; Jeffrey R. Cottrell; Florence F. Wagner; Mark J. Daly; et al. (Nucleic Acids Res., 2020)

MultiResUNet : Rethinking the U-Net architecture for multimodal biomedical image segmentation. - Nabil Ibtehaz; M. Sohel Rahman (Neural Networks, 2020)

XL-Sum: Large-Scale Multilingual Abstractive Summarization for 44 Languages. - Tahmid Hasan; Abhik Bhattacharjee; Md. Saiful Islam; Kazi Samin Mubasshir; Yuan-Fang Li; Yong-Bin Kang; M. Sohel Rahman; Rifat Shahriyar (ACL/IJCNLP (Findings), 2021)

Gulf Cooperation Council Clinical Trials in the Pursuit of Medications for COVID-19. - Bassam Ali Jaber; Mowafa S. Househ; Zubair Shah; M. Sohel Rahman; Mounir Hamdi; Kabir H. Biswas; Tanvir Alam (ICIMTH, 2021)

The Linkage Between Bone Densitometry and Cardiovascular Disease. - Mahmoud Ahmed Refaee; Hamada R. H. Al-Absi; Mohammad Tariqul Islam 002; Mowafa S. Househ; Zubair Shah; M. Sohel Rahman; Tanvir Alam (ICIMTH, 2021)

Linking Tweets Towards Geo-Localized Policies: COVID-19 Perspective. - Sheikh Saifur Rahman Jony; Rifat Shahriyar; M. Saifur Rahman; M. Sohel Rahman; Tanvir Alam (MedInfo, 2021)

Phylogenetic Analyses of SARS-CoV-2 Strains Reveal Its Link to the Spread of COVID-19 Across the Globe. - Shashata Sawmya; Arpita Saha; Sadia Tasnim; Naser Anjum Samudro; Md. Toufikuzzaman; Ali Haisam Muhammad Rafid; Mohammad Saifur Rahman 001; M. Sohel Rahman; Tanvir Alam (MedInfo, 2021)

SICaRiO: short indel call filtering with boosting. - Md Shariful Islam Bhuyan; Itsik Pe'er; M. Sohel Rahman (Briefings Bioinform., 2021)

SSG-LUGIA: Single Sequence based Genome Level Unsupervised Genomic Island Prediction Algorithm. - Nabil Ibtehaz; Ishtiaque Ahmed; Md. Sabbir Ahmed; M. Sohel Rahman; Rajeev K. Azad; Md. Shamsuzzoha Bayzid (Briefings Bioinform., 2021)

ADACT: a tool for analysing (dis)similarity among nucleotide and protein sequences using minimal and relative absent words. - Mujtahid Akon; Muntashir Akon; Mohimenul Kabir; Mohammad Saifur Rahman 001; M. Sohel Rahman (Bioinform., 2021)

A contour property based approach to segment nuclei in cervical cytology images. - Iram Tazim Hoque; Nabil Ibtehaz; Saumitra Chakravarty; Mohammad Saifur Rahman 001; M. Sohel Rahman (BMC Medical Imaging, 2021)

COVID-19 infection localization and severity grading from chest X-ray images. - Anas M. Tahir; Muhammad Enamul Hoque Chowdhury; Amith Khandakar; Tawsifur Rahman; Yazan Qiblawey; Uzair Khurshid; Serkan Kiranyaz; Nabil Ibtehaz; M. Sohel Rahman; Somaya Al-Máadeed; Sakib Mahmud; Maymouna Ezeddin; et al. (Comput. Biol. Medicine, 2021)

BanglaBERT: Combating Embedding Barrier for Low-Resource Language Understanding. - Abhik Bhattacharjee; Tahmid Hasan; Kazi Samin; M. Sohel Rahman; Anindya Iqbal; Rifat Shahriyar (CoRR, 2021)

XL-Sum: Large-Scale Multilingual Abstractive Summarization for 44 Languages. - Tahmid Hasan; Abhik Bhattacharjee; Md Saiful Islam; Kazi Samin; Yuan-Fang Li; Yong-Bin Kang; M. Sohel Rahman; Rifat Shahriyar (CoRR, 2021)

Counting and Verifying Abelian Border Arrays of Binary Words. - Mursalin Habib; Md. Salman Shamil; M. Sohel Rahman (CoRR, 2021)

A Shallow U-Net Architecture for Reliably Predicting Blood Pressure (BP) from Photoplethysmogram (PPG) and Electrocardiogram (ECG) Signals. - Sakib Mahmud; Nabil Ibtehaz; Amith Khandakar; Anas M. Tahir; Tawsifur Rahman; Khandaker Reajul Islam; Md. Shafayet Hossain; M. Sohel Rahman; Mohammad Tariqul Islam 001; Muhammad Enamul Hoque Chowdhury (CoRR, 2021)

Segmentation of Lung Tumor from CT Images using Deep Supervision. - Farhanaz Farheen; Md. Salman Shamil; Nabil Ibtehaz; M. Sohel Rahman (CoRR, 2021)

Guest editors' foreword. - M. Sohel Rahman; Kunihiko Sadakane; Wing-Kin Sung (J. Graph Algorithms Appl., 2021)

Algorithms and Discrete Mathematics - celebrating the silver jubilee of IITG Guwahati. - Gautam Kumar Das; Subhas C. Nandy; M. Sohel Rahman (Theor. Comput. Sci., 2021)

Multidimensional segment trees can do range updates in poly-logarithmic time. - Nabil Ibtehaz; M. Kaykobad; M. Sohel Rahman (Theor. Comput. Sci., 2021)

A linear time algorithm for the r-gathering problem on the line. - Anik Sarker; Wing-Kin Sung; M. Sohel Rahman (Theor. Comput. Sci., 2021)

BanglaBERT: Language Model Pretraining and Benchmarks for Low-Resource Language Understanding Evaluation in Bangla. - Abhik Bhattacharjee; Tahmid Hasan; Wasi Uddin Ahmad; Kazi Samin Mubasshir; Md Saiful Islam; Anindya Iqbal; M. Sohel Rahman; Rifat Shahriyar (NAACL-HLT (Findings), 2022)

QT-GILD: Quartet Based Gene Tree Imputation Using Deep Learning Improves Phylogenomic Analyses Despite Missing Data. - Sazan Mahbub; Shashata Sawmya; Arpita Saha; Rezwana Reaz; M. Sohel Rahman; Md. Shamsuzzoha Bayzid (RECOMB, 2022)

PASTA with many application-aware optimization criteria for alignment based phylogeny inference. - Muhammad Ali Nayeem; Md. Shamsuzzoha Bayzid; Naser Anjum Samudro; Mohammad Saifur Rahman 001; M. Sohel Rahman (Comput. Biol. Chem., 2022)

Revisiting segmentation of lung tumors from CT images. - Farhanaz Farheen; Md. Salman Shamil; Nabil Ibtehaz; M. Sohel Rahman (Comput. Biol. Medicine, 2022)

Lung-Originated Tumor Segmentation from Computed Tomography Scan (LOTUS) Benchmark. - Parnian Afshar; Arash Mohammadi 001; Konstantinos N. Plataniotis; Keyvan Farahani; Justin S. Kirby; Anastasia Oikonomou; Amir Asif; Leonard Wee; Andre Dekker; Xin Wu; Mohammad Ariful Haque; Shahruk Hossain; et al. (CoRR, 2022)

Data transformation based optimized customer churn prediction model for the telecommunication industry. - Joydeb Kumar Sana; Mohammad Zoynul Abedin; M. Sohel Rahman; Mohammad Saifur Rahman 001 (CoRR, 2022)

Predicting Pulmonary Function From the Analysis of Voice: A Machine Learning Approach. - Md. Zahangir Alam; Albino Simonetti; Raffaele Brillantino; Nick Tayler; Chris Grainge; Pandula Siribaddana; S. A. Reza Nouraei; James Batchelor; M. Sohel Rahman; Eliane V. Mancuzo; John W. Holloway; Judith A. Holloway; et al. (Frontiers Digit. Health, 2022)

Quartet Based Gene Tree Imputation Using Deep Learning Improves Phylogenomic Analyses Despite Missing Data. - Sazan Mahbub; Shashata Sawmya; Arpita Saha; Rezwana Reaz; M. Sohel Rahman; Md. Shamsuzzoha Bayzid (J. Comput. Biol., 2022)

Characterization of intrinsically disordered regions in proteins informed by human genetic diversity. - Shehab S. Ahmed; Zaara T. Rifat; Ruchi Lohia; Arthur J. Campbell; A. Keith Dunker; M. Sohel Rahman; Sumaiya Iqbal (PLoS Comput. Biol., 2022)

A Shallow U-Net Architecture for Reliably Predicting Blood Pressure (BP) from Photoplethysmogram (PPG) and Electrocardiogram (ECG) Signals. - Sakib Mahmud; Nabil Ibtehaz; Amith Khandakar; Anas M. Tahir; Tawsifur Rahman; Khandaker Reajul Islam; Md. Shafayet Hossain; M. Sohel Rahman; Farayi Musharavati; Mohamed Arselene Ayari; Mohammad Tariqul Islam 001; Muhammad Enamul Hoque Chowdhury (Sensors, 2022)

Computing the longest common almost-increasing subsequence. - Mohammad Tawhidul Hasan Bhuiyan; Muhammad Rashed Alam; M. Sohel Rahman (Theor. Comput. Sci., 2022)

Multiobjective Formulation of Multiple Sequence Alignment for Phylogeny Inference. - Muhammad Ali Nayeem; Md. Shamsuzzoha Bayzid; Atif Hasan Rahman 001; Rifat Shahriyar; M. Sohel Rahman (IEEE Trans. Cybern., 2022)

EDITH : ECG Biometrics Aided by Deep Learning for Reliable Individual Authentication. - Nabil Ibtehaz; Muhammad Enamul Hoque Chowdhury; Amith Khandakar; Serkan Kiranyaz; M. Sohel Rahman; Anas Tahir; Yazan Qiblawey; Tawsifur Rahman (IEEE Trans. Emerg. Top. Comput. Intell., 2022)

Neural Network-Based Undersampling Techniques. - Md. Adnan Arefeen; Sumaiya Tabassum Nimi; M. Sohel Rahman (IEEE Trans. Syst. Man Cybern. Syst., 2022)

Forward Diffusion Guided Reconstruction as a Multi-Modal Multi-Task Learning Scheme. - Najibul Haque Sarker; M. Sohel Rahman (ICIP, 2023)

Soft-Touch or Hard-Touch: Quantifying Touches through A New System Focusing on A Pool Touchpad for Measuring Timing of Swimmers. - Adnan Quaium; Md. Ashraful Islam; M. Sohel Rahman; A. B. M. Alim Al Islam (NSysS, 2023)

NABNet: A Nested Attention-guided BiConvLSTM network for a robust prediction of Blood Pressure components from reconstructed Arterial Blood Pressure waveforms using PPG and ECG signals. - Sakib Mahmud; Nabil Ibtehaz; Amith Khandakar; M. Sohel Rahman; Antonio JR. Gonzales; Tawsifur Rahman; Md. Shafayet Hossain; Md Sakib Abrar Hossain; Md. Ahasan Atick Faisal; Farhan Fuad Abir; Farayi Musharavati; Muhammad Enamul Hoque Chowdhury (Biomed. Signal Process. Control., 2023)

Quantifying imbalanced classification methods for leukemia detection. - Deponker Sarker Depto; Md. Mashfiq Rizvee; Aimon Rahman; Hasib Zunair; M. Sohel Rahman; M. R. C. Mahdy (Comput. Biol. Medicine, 2023)

Image Contrast Enhancement using Fuzzy Technique with Parameter Determination using Metaheuristics. - Mohimenul Kabir; Jaiaid Mobin; Ahmad B. A. Hassanat; M. Sohel Rahman (CoRR, 2023)

Ophthalmic Biomarker Detection Using Ensembled Vision Transformers - Winning Solution to IEEE SPS VIP Cup 2023. - H. A. Z. Sameen Shahgir; Khondker Salman Sayeed; Tanjeem Azwad Zaman; Md. Asif Haider; Sheikh Saifur Rahman Jony; M. Sohel Rahman (CoRR, 2023)

Succinylated lysine residue prediction revisited. - Shehab Sarar Ahmed; Zaara Tasnim Rifat; M. Saifur Rahman; M. Sohel Rahman (Briefings Bioinform., 2023)

MAMMLE: A Framework for Phylogeny Estimation Based on Multiobjective Application-aware Multiple Sequence Alignment and Maximum Likelihood Ensemble. - Muhammad Ali Nayeem; Naser Anjum Samudro; Mohammad Saifur Rahman 001; M. Sohel Rahman (J. Comput. Biol., 2023)

Federated learning-based AI approaches in smart healthcare: concepts, taxonomies, challenges and open issues. - Anichur Rahman; Md. Sazzad Hossain; Ghulam Muhammad; Dipanjali Kundu; Tanoy Debnath; M. Sohel Rahman; Md. Saikat Islam Khan; Prayag Tiwari; Shahab S. Band (Clust. Comput., 2023)

RamanNet: a generalized neural network architecture for Raman spectrum analysis. - Nabil Ibtehaz; Muhammad Enamul Hoque Chowdhury; Amith Khandakar; Serkan Kiranyaz; M. Sohel Rahman; Susu M. Zughaier (Neural Comput. Appl., 2023)

CIMCA: Infusing computational intelligence in multi-criteria analysis to assess groundwater potential for recharge. - Rashed Uz Zzaman; Muhammad Ali Nayeem; Sara Nowreen; Imran Hossain Newton; AKM Saiful Islam; Anwar Zahid; M. Sohel Rahman (Environ. Model. Softw., 2023)

Image Contrast Enhancement using Fuzzy Logic with Metaheuristics. - Mohimenul Kabir; Jaiaid Mobin; Ahmad B. A. Hassanat; M. Sohel Rahman (NSysS, 2024)

PRIEST: predicting viral mutations with immune escape capability of SARS-CoV-2 using temporal evolutionary information. - Gourab Saha; Shashata Sawmya; Arpita Saha; Md Ajwad Akil; Sadia Tasnim; Md Saifur Rahman; M. Sohel Rahman (Briefings Bioinform., 2024)

CRISPR-DIPOFF: an interpretable deep learning approach for CRISPR Cas-9 off-target prediction. - Md. Toufikuzzaman; Md. Abul Hassan Samee; M. Sohel Rahman (Briefings Bioinform., 2024)

Privacy-Preserving Customer Churn Prediction Model in the Context of Telecommunication Industry. - Joydeb Kumar Sana; M. Sohel Rahman; Mohammad Saifur Rahman 001 (CoRR, 2024)

Algorithms for Parameterized String Matching with Mismatches. - Apurba Saha; Iftekhar Hakim Kaowsar; Mahdi Hasnat Siyam; M. Sohel Rahman (CoRR, 2024)

An Agent-Based Modeling of COVID-19: Validation, Analysis, and Recommendations. - Md. Salman Shamil; Farhanaz Farheen; Nabil Ibtehaz; Irtesam Mahmud Khan; M. Sohel Rahman (Cogn. Comput., 2024)

A novel loan eligibility prediction model with effective use of data transformation methods. - Joydeb Kumar Sana; M. Sohel Rahman; Mohammad Saifur Rahman 001 (Knowl. Based Syst., 2025)

A light-weight model to generate NDWI from Sentinel-1. - Saleh Sakib Ahmed; Saifur Rahman Jony; Md. Toufikuzzaman; Saifullah Sayed; Rashed Uz Zzaman; Sara Nowreen; M. Sohel Rahman (CoRR, 2025)

GroundHog: Revolutionizing GLDAS Groundwater Storage Downscaling for Enhanced Recharge Estimation in Bangladesh. - Saleh Sakib Ahmed; Rashed Uz Zzaman; Saifur Rahman Jony; Faizur Rahman Himel; Afroza Sharmin; A. H. M. Khalequr Rahman; M. Sohel Rahman; Sara Nowreen (CoRR, 2025)

Entropy-Driven Genetic Optimization for Deep-Feature-Guided Low-Light Image Enhancement. - Nirjhor Datta; Afroza Akther; M. Sohel Rahman (CoRR, 2025)

LogStamping: A blockchain-based log auditing approach for large-scale systems. - Md Shariful Islam; M. Sohel Rahman (CoRR, 2025)

ConVerSum: A Contrastive Learning-Based Approach for Data-Scarce Solution of Cross-Lingual Summarization Beyond Direct Equivalents. - Sanzana Karim Lora; M. Sohel Rahman; Rifat Shahriyar (ACM Trans. Asian Low Resour. Lang. Inf. Process., 2025)

Patient Similarity Computation for Clinical Decision Support: An Efficient Use of Data Transformation, Combining Static and Time Series Data. - Joydeb Kumar Sana; Mohammad M. Masud 001; M. Sohel Rahman; M. Saifur Rahman (CoRR, 2025)

CloudBreaker: Breaking the Cloud Covers of Sentinel-2 Images using Multi-Stage Trained Conditional Flow Matching on Sentinel-1. - Saleh Sakib Ahmed; Sara Nowreen; M. Sohel Rahman (CoRR, 2025)

Improving MSA Estimation through Adaptive Weight Vectors in MOEA/D. - Saem Hasan; Muhammad Ali Nayeem; M. Sohel Rahman (CoRR, 2025)

Computational Intelligence based Land-use Allocation Approaches for Mixed Use Areas. - Sabab Aosaf; Muhammad Ali Nayeem; Afsana Haque; M. Sohel Rahman (CoRR, 2025)