Applications of genome-scale metabolic models to investigate microbial metabolic adaptations in response to genetic or environmental perturbations. - Elena Lucy Carter; Chrystala Constantinidou; Mohammad Tauqeer Alam (Briefings Bioinform., 2023)

Integrative systems biology approaches for analyzing microbiome dysbiosis and species interactions. - Syed Sabih Ur Rehman; Muhammad Ibtisam Nasar; Cristina S. Mesquita; Souhaila Al Khodor; Richard A. Notebaart; Sascha Ott; Sunil Mundra; Ramesh P. Arasardanam; Khalid Muhammad; Mohammad Tauqeer Alam (Briefings Bioinform., 2025)