Visualization methods for molecular studies on the web platform. - Marco Callieri; Raluca Mihaela Andrei; Marco Di Benedetto 001; Monica Zoppè; Roberto Scopigno (Web3D, 2010)

BioBlender: a Software for Intuitive Representation of Surface Properties of Biomolecules - Raluca Mihaela Andrei; Marco Callieri; Maria Francesca Zini; Tiziana Loni; Giuseppe Maraziti; Mike Chen Pan; Monica Zoppè (CoRR, 2010)

Intuitive representation of surface properties of biomolecules using BioBlender. - Raluca Mihaela Andrei; Marco Callieri; Maria Francesca Zini; Tiziana Loni; Giuseppe Maraziti; Mike Chen Pan; Monica Zoppè (BMC Bioinform., 2012)

Inferring 3D chromatin structure using a multiscale approach based on quaternions. - Claudia Caudai; Emanuele Salerno; Monica Zoppè; Anna Tonazzini (BMC Bioinform., 2015)

Parallelizable Strategy for the Estimation of the 3D Structure of Biological Macromolecules. - Claudia Caudai; Monica Zoppè; Emanuele Salerno; Ivan Merelli; Anna Tonazzini (PDP, 2018)

Making of The Dark Anim: Technical and Scientific Notes. - Monica Zoppè; Tiziana Loni; Ilaria Carlone; Stefano Cianchetta (CW, 2019)

Computational Fabrication of Macromolecules to Enhance Perception and Understanding of Biological Mechanisms. - Thomas Alderighi; Daniela Giorgi; Luigi Malomo; Paolo Cignoni; Monica Zoppè (STAG, 2019)

ChromStruct 4: A Python Code to Estimate the Chromatin Structure from Hi-C Data. - Claudia Caudai; Emanuele Salerno; Monica Zoppè; Ivan Merelli; Anna Tonazzini (IEEE ACM Trans. Comput. Biol. Bioinform., 2019)

Estimation of the Spatial Chromatin Structure Based on a Multiresolution Bead-Chain Model. - Claudia Caudai; Emanuele Salerno; Monica Zoppè; Anna Tonazzini (IEEE ACM Trans. Comput. Biol. Bioinform., 2019)

Computational design, fabrication and evaluation of rubber protein models. - Thomas Alderighi; Daniela Giorgi; Luigi Malomo; Paolo Cignoni; Monica Zoppè (Comput. Graph., 2021)

Methods developed for the implementation of a new version of BioBlender. - Pablo Enmanuel Ramos Bermúdez; Monica Zoppè; Tiziana Loni; Mario Pupo-Meriño; Edisel Navas Conyedo (HCI-COLLAB, 2022)

Colors in the representation of biological structures. - Monica Zoppè (J. Integr. Bioinform., 2022)