Analysis of energy-based algorithms for RNA secondary structure prediction. - Monir Hajiaghayi; Anne Condon; Holger H. Hoos (BMC Bioinform., 2012)

Efficient Continuous-Time Markov Chain Estimation. - Monir Hajiaghayi; Bonnie Kirkpatrick; Liangliang Wang; Alexandre Bouchard-Côté (ICML, 2014)

Leaderless deterministic chemical reaction networks. - David Doty; Monir Hajiaghayi (Nat. Comput., 2015)

Simplifying Analyses of Chemical Reaction Networks for Approximate Majority. - Anne Condon; Monir Hajiaghayi; David G. Kirkpatrick; Ján Manuch (DNA, 2017)

Approximate majority analyses using tri-molecular chemical reaction networks. - Anne Condon; Monir Hajiaghayi; David G. Kirkpatrick; Ján Manuch (Nat. Comput., 2020)

Predicting Minimum Free Energy Structures of Multi-Stranded Nucleic Acid Complexes Is APX-Hard. - Anne Condon; Monir Hajiaghayi; Chris Thachuk (DNA, 2021)

Unbiased Sentence Encoder For Large-Scale Multi-lingual Search Engines. - Mahdi Hajiaghayi; Monir Hajiaghayi; Mark Bolin (CoRR, 2021)