HALPER facilitates the identification of regulatory element orthologs across species. - Xiaoyu Zhang; Irene M. Kaplow; Morgan Wirthlin; Tae Yoon Park; Andreas R. Pfenning (Bioinform., 2020)

Cytosplore EvoViewer: Visual Analytics of Conserved Evolutionary Patterns in multi-species single-cell sequencing data. - Soumyadeep Basu; Morgan Wirthlin; Jeroen Eggermont; Thomas Kroes; Boudewijn P. F. Lelieveldt; Ed S. Lein; Trygve E. Bakken; Thomas Höllt (PacificVis, 2025)