Performance and analysis of modified voting algorithm for planted motif search. - Mostafa M. Abbas; Hazem M. Bahig (AICCSA, 2009)

A hybrid method for the exact planted (l, d) motif finding problem and its parallelization. - Mostafa M. Abbas; Mohamed Abouelhoda; Hazem M. Bahig (BMC Bioinform., 2012)

An Efficient Algorithm to Identify DNA Motifs. - Mostafa M. Abbas; Hazem M. Bahig (Math. Comput. Sci., 2013)

Scalable Multi-core Implementation for Motif Finding Problem. - Mostafa M. Abbas; Qutaibah M. Malluhi; Ponnuraman Balakrishnan (ISPDC, 2014)

Parallelizing exact motif finding algorithms on multi-core. - Mostafa M. Abbas; Hazem M. Bahig; Mohamed Abouelhoda; Mustafa M. Mohie-Eldin (J. Supercomput., 2014)

Evaluation of Combined Genome Assemblies: A Case Study with Fungal Genomes. - Mostafa M. Abbas; Ponnuraman Balakrishnan; Qutaibah M. Malluhi (IWBBIO (2), 2015)

Approximate Data Dependence Graph Generation Using Adaptive Sampling. - Mostafa M. Abbas; Ahmed El-Mahdy 002 (ICPP Workshops, 2016)

A fast exact sequential algorithm for the partial digest problem. - Mostafa M. Abbas; Hazem M. Bahig (BMC Bioinform., 2016)

Predictive and Comparative Network Analysis of the Gut Microbiota in Type 2 Diabetes. - Mostafa M. Abbas; Yasser El-Manzalawy (BCB, 2017)

In-Memory Distributed Matrix Computation Processing and Optimization. - Yongyang Yu; MingJie Tang; Walid G. Aref; Qutaibah M. Malluhi; Mostafa M. Abbas; Mourad Ouzzani (ICDE, 2017)

Parallelizing Partial Digest Problem on Multicore System. - Hazem M. Bahig; Mostafa M. Abbas; Mustafa M. Mohie-Eldin (IWBBIO (2), 2017)

Microbiomarkers Discovery in Inflammatory Bowel Diseases using Network-Based Feature Selection. - Mostafa M. Abbas; Thanh Le; Halima Bensmail; Vasant G. Honavar; Yasser El-Manzalawy (BCB, 2018)

Toward Perception-Based Evaluation of Clustering Techniques for Visual Analytics. - Michaël Aupetit 001; Michael Sedlmair; Mostafa M. Abbas; Abdelkader Baggag; Halima Bensmail (IEEE VIS (Short Papers), 2019)

ClustMe: A Visual Quality Measure for Ranking Monochrome Scatterplots based on Cluster Patterns. - Mostafa M. Abbas; Michaël Aupetit 001; Michael Sedlmair; Halima Bensmail (Comput. Graph. Forum, 2019)

Approximate Data Dependence Profiling Based on Abstract Interval and Congruent Domains. - Mostafa M. Abbas; Rasha Salah Omar; Ahmed El-Mahdy 002; Erven Rohou (ARCS, 2020)

OutPyR: Bayesian inference for RNA-Seq outlier detection. - Edin Salkovic; Mostafa M. Abbas; Samir Brahim Belhaouari; Khaoula Errafii; Halima Bensmail (J. Comput. Sci., 2020)

ClustRank: a Visual Quality Measure Trained on Perceptual Data for Sorting Scatterplots by Cluster Patterns. - Mostafa M. Abbas; Ehsan Ullah; Abdelkader Baggag; Halima Bensmail; Michael Sedlmair; Michaël Aupetit 001 (CoRR, 2021)

OASIS +: leveraging machine learning to improve the prognostic accuracy of OASIS severity score for predicting in-hospital mortality. - Yasser El-Manzalawy; Mostafa M. Abbas; Ian Hoaglund; Alvaro Ulloa Cerna; Thomas B. Morland; Christopher M. Haggerty; Eric S. Hall; Brandon K. Fornwalt (BMC Medical Informatics Decis. Mak., 2021)

Accelerating Data Dependence Profiling Through Abstract Interpretation of Loop Instructions. - Mostafa M. Abbas; Mostafa I. Soliman; Sherif I. Rabia; Keiji Kimura; Ahmed El-Mahdy 002 (IEEE Access, 2022)

Datasets and code for ClustMe and ClustML visual quality measures of grouping patterns in monochrome scatterplots. - Mostafa M. Abbas; Ehsan Ullah; Abdelkader Baggag; Halima Bensmail; Michael Sedlmair; Michaël Aupetit 001 (Zenodo, 2023)