New Algorithms to Predict Secondary Structures of RNA Macromolecules. - Mourad Elloumi (IEA/AIE (Vol. 1), 1998)

Comparison of Strings Belonging to the Same Family. - Mourad Elloumi (Inf. Sci., 1998)

Algorithms for the shortest exact common superstring problem. - Mourad Elloumi (South Afr. Comput. J., 2000)

Algorithms for the Prediction of Secondary Structures of RNA Macromolecules. - Mourad Elloumi (Int. J. Comput. Their Appl., 2002)

Foreword. - Mourad Elloumi (Knowl. Based Syst., 2002)

A data mining approach based on machine learning techniques to classify biological sequences. - Mondher Maddouri; Mourad Elloumi (Knowl. Based Syst., 2002)

Encoding of Primary Structures of Biological Macromolecules Within a Data Mining Perspective. - Mondher Maddouri; Mourad Elloumi (J. Comput. Sci. Technol., 2004)

Hybrid Feature Ranking for Proteins Classification. - Ricco Rakotomalala; Faouzi Mhamdi; Mourad Elloumi (ADMA, 2005)

Feature Ranking for Protein Classification. - Faouzi Mhamdi; Ricco Rakotomalala; Mourad Elloumi (CORES, 2005)

New voting strategies designed for the classification of nucleic sequences. - Mourad Elloumi; Mondher Maddouri (Knowl. Inf. Syst., 2005)

A Hierarchical n-Grams Extraction Approach for Classification Problem. - Faouzi Mhamdi; Ricco Rakotomalala; Mourad Elloumi (SITIS, 2006)

An Algorithm for Multiple and Global Alignments. - Mourad Elloumi; Ahmed Mokaddem (BIRD, 2008)

A New Approximation Algorithm for the Minimum Fragment Removal Problem. - Hatem Tahri; Mourad Elloumi (BIRD, 2008)

A new survey on knowledge discovery and data mining. - Faouzi Mhamdi; Mourad Elloumi (RCIS, 2008)

A biclustering algorithm based on a Bicluster Enumeration Tree: application to DNA microarray data. - Wassim Ayadi; Mourad Elloumi; Jin-Kao Hao (BioData Min., 2009)

SMS-Forbid: An Efficient Agorithm for Simple Motif Problem. - Tarek El Falah; Thierry Lecroq; Mourad Elloumi (BICoB, 2010)

Iterated Local Search for Biclustering of Microarray Data. - Wassim Ayadi; Mourad Elloumi; Jin-Kao Hao (PRIB, 2010)

Block Mixture Model for the Biclustering of Microarray Data. - Haifa Ben Saber; Mourad Elloumi; Mohamed Nadif (DEXA Workshops, 2011)

An Efficient Motif Search Algorithm Based on a Minimal Forbidden Patterns Approach. - Tarek El Falah; Thierry Lecroq; Mourad Elloumi (PACBB, 2011)

PAAA: A Progressive Iterative Alignment Algorithm Based on Anchors. - Ahmed Mokaddem; Mourad Elloumi (PRIB, 2011)

New Distances for Improving Progressive Alignment Algorithm. - Ahmed Mokaddem; Mourad Elloumi (ACITY (2), 2012)

Detection of fixed length web spambot using REAL (read aligner). - Mourad Elloumi; Pedram Hayati; Costas S. Iliopoulos; Solon P. Pissis; Arfaat Shah (CUBE, 2012)

A New Progressive Multiple Sequence Alignment Algorithm. - Soumaya Hosni; Ahmed Mokaddem; Mourad Elloumi (DEXA Workshops, 2012)

Pattern-driven neighborhood search for biclustering of microarray data. - Wassim Ayadi; Mourad Elloumi; Jin-Kao Hao (BMC Bioinform., 2012)

BicFinder: a biclustering algorithm for microarray data analysis. - Wassim Ayadi; Mourad Elloumi; Jin-Kao Hao (Knowl. Inf. Syst., 2012)

BiMine+: An efficient algorithm for discovering relevant biclusters of DNA microarray data. - Wassim Ayadi; Mourad Elloumi; Jin-Kao Hao (Knowl. Based Syst., 2012)

Motalign: A Multiple Sequence Alignment Algorithm Based on a New Distance and a New Score Function. - Ahmed Mokaddem; Mourad Elloumi (DEXA Workshops, 2013)

A fast pattern matching algorithm for highly similar sequences. - Nadia Ben Nsira; Thierry Lecroq; Mourad Elloumi (BIBM, 2014)

A Consensus Algorithm for Simple Motifs Finding. - Tarek El Falah; Maroua Ghnimi; Mourad Elloumi (DEXA Workshops, 2014)

Error correction and DeNovo genome Assembly for the MinIon sequencing reads mixing Illumina short reads. - Mehdi Kchouk; Mourad Elloumi (BIBM, 2015)

A Hybrid Possibilistic Algorithm for Biclustering: Application to Microarray Data Analysis. - Haifa Ben Saber; Mourad Elloumi (DEXA Workshops, 2015)

Arabic handwritten words off-line recognition based on HMMs and DBNs. - Akram Khemiri; Afef Kacem Echi; Abdel Belaïd; Mourad Elloumi (ICDAR, 2015)

An Enumerative Biclustering Algorithm for DNA Microarray Data. - Haifa Ben Saber; Mourad Elloumi (ICDM Workshops, 2015)

Optimal predictor and implicit self-tuning regulator for a class of Hammerstein large-scale systems. - Mourad Elloumi; Samira Kamoun (ICSC, 2015)

BiBinConvmean : A Novel Biclustering Algorithm for Binary Microarray Data. - Haifa Ben Saber; Mourad Elloumi (SEKE, 2015)

A novel biclustering algorithm of binary microarray data: BiBinCons and BiBinAlter. - Haifa Ben Saber; Mourad Elloumi (BioData Min., 2015)

A fast Boyer-Moore type pattern matching algorithm for highly similar sequences. - Nadia Ben Nsira; Thierry Lecroq; Mourad Elloumi (Int. J. Data Min. Bioinform., 2015)

Hybrid error correction approach and de novo assembly for minion sequencing long reads. - Mehdi Kchouk; Mourad Elloumi (BIBM, 2016)

A clustering approach for denovo assembly using Next Generation Sequencing data. - Mehdi Kchouk; Mourad Elloumi (BIBM, 2016)

Efficient Hybrid De Novo Error Correction and Assembly for Long Reads. - Mehdi Kchouk; Mourad Elloumi (DEXA Workshops, 2016)

A System for Off-Line Arabic Handwritten Word Recognition Based on Bayesian Approach. - Akram Khemiri; Afef Kacem Echi; Abdel Belaïd; Mourad Elloumi (ICFHR, 2016)

A Comparison Between Classification Algorithms for Postmenopausal Osteoporosis Prediction in Tunisian Population. - Naoual Guannoni; Rim Sassi; Walid Bedhiafi; Mourad Elloumi (ITBAM, 2016)

Parametric estimation of interconnected nonlinear systems described by input-output mathematical models. - Mourad Elloumi; Samira Kamoun (Int. J. Autom. Comput., 2016)

An iterative parametric estimation method for Hammerstein large-scale systems: a simulation study of hydraulic process. - Mourad Elloumi; Samira Kamoun (Int. J. Simul. Process. Model., 2016)

Algorithms for Indexing Highly Similar DNA Sequences. - Nadia Ben Nsira; Thierry Lecroq; Mourad Elloumi (Algorithms for Next-Generation Sequencing Data, 2017)

An Error Correction Algorithm for NGS Data. - Mehdi Kchouk; Jean-François Gibrat; Mourad Elloumi (DEXA Workshops, 2017)

An enumerative biclustering algorithm based on greatest common divisor: application to DNA microarray data. - Haifa Ben Saber; Mourad Elloumi (Int. J. Comput. Appl. Technol., 2017)

On-line String Matching in Highly Similar DNA Sequences. - Nadia Ben Nsira; Mourad Elloumi; Thierry Lecroq (Math. Comput. Sci., 2017)

Structural Parameter Identification Approaches for Interconnected Nonlinear Systems. - Mourad Elloumi; Afef Ghanmi; Samira Kamoun (SSD, 2018)

Suitable Overlapping Set Visualization Techniques and Their Application to Visualize Biclustering Results on Gene Expression Data. - Haithem Aouabed; Rodrigo Santamaría; Mourad Elloumi (DEXA Workshops, 2018)

Pro-malign: Multiple Sequence Alignment Algorithm using Approached Profile. - Ahmed Mokaddem; Amine Bel Haj; Mourad Elloumi (J. Softw., 2018)

Fast Bat Algorithm for Predicting Diabetes Mellitus Using Association Rule Mining. - Hend Amraoui; Faouzi Mhamdi; Mourad Elloumi (ADMA, 2019)

Theoretical and Practical Analyses in Metagenomic Sequence Classification. - Hend Amraoui; Mourad Elloumi; Francesco Marcelloni; Faouzi Mhamdi; Davide Verzotto (DEXA Workshops, 2019)

Association Rule Mining Using Discrete Jaya Algorithm. - Hend Amraoui; Faouzi Mhamdi; Mourad Elloumi (HPCS, 2019)

Novel algorithm to extract multiple solutions for RNA sequence classification problem. - Naoual Guannoni; Faouzi Mhamdi; Emanuel Weitschek; Mourad Elloumi (HPCS, 2019)

Improved Feature Selection Algorithm for Biological Sequences Classification. - Naoual Guannoni; Faouzi Mhamdi; Mourad Elloumi (KSEM (1), 2019)

Fast Exhaustive Search Algorithm for Discovering Relevant Association Rules. - Hend Amraoui; Faouzi Mhamdi; Mourad Elloumi (SEKE, 2019)

Over parameterisation and optimisation approaches for identification of nonlinear stochastic systems described by Hammerstein-Wiener models. - Saif Eddine Abouda; Mourad Elloumi; Yassine Koubaa; Abdessattar Chaari (Int. J. Model. Identif. Control., 2019)

Refin-Align: New Refinement Algorithm For Multiple Sequence Alignment. - Ahmed Mokaddem; Amine Belhadi; Mourad Elloumi (Informatica (Slovenia), 2019)

Hierarchical Parameter Estimation for Wiener-Hammerstein Systems. - Afef Ghanmi; Houda Salhi; Mourad Elloumi; Samira Kamoun (SSD, 2020)

Identification of non-linear stochastic systems using a new Hammerstein-Wiener neural network: a simulation study through a non-linear hydraulic process. - Saif Eddine Abouda; Donia Ben Halima Abid; Mourad Elloumi; Yassine Koubaa; Abdessattar Chaari (Int. J. Comput. Appl. Technol., 2020)

Bayesian Integrative Modeling of Genome-Scale Metabolic and Regulatory Networks. - Hanen Mhamdi; Jérémie Bourdon; Abdelhalim Larhlimi; Mourad Elloumi (Informatics, 2020)

VisBicluster: A Matrix-Based Bicluster Visualization of Expression Data. - Haithem Aouabed; Rodrigo Santamaría; Mourad Elloumi (J. Comput. Biol., 2020)

Visualizing Biclustering Results on Gene Expression Data: A Survey. - Haithem Aouabed; Rodrigo Santamaría; Mourad Elloumi (ICBBT, 2021)

Improved Multiple Part Algorithm (IMPA) to extract multiple solutions for RNA sequence classification problem. - Naoual Guannoni; Faouzi Mhamdi; Mourad Elloumi (SEKE, 2021)

Special Issue of the 1st International Applied Bioinformatics Conference (iABC'21). - Jens Allmer; Mourad Elloumi; Matteo Comin; Ralf Hofestädt (J. Integr. Bioinform., 2021)

An evaluation study of biclusters visualization techniques of gene expression data. - Haithem Aouabed; Mourad Elloumi; Rodrigo Santamaría (J. Integr. Bioinform., 2021)

Robust fault estimation for polynomial systems with time delay via a polynomial adaptive observer. - Hamdi Gassara; Mourad Elloumi; Omar Naifar; Abdellatif Ben Makhlouf (Trans. Inst. Meas. Control, 2023)

Offloading-verified framework for adversary detection and mitigation in IoT. - Nadhem Ebrahim; Mourad Elloumi; Abdullah Mohammed Alharthi; Fahad S. Altuwaijri; Mohammed Alsaadi (Appl. Soft Comput., 2025)