Exploiting In-memory Systems for Genomic Data Analysis. - Zeeshan Ali Shah; Mohamed El-Kalioby; Tariq Faquih; Moustafa Shokrof; Shazia Subhani; Yasser Alnakhli; Hussain Aljafar; Ashiq Anjum; Mohamed Abouelhoda (IWBBIO (1), 2018)

IonCRAM: a reference-based compression tool for ion torrent sequence files. - Moustafa Shokrof; Mohamed Abouelhoda (BMC Bioinform., 2020)

Correction to: IonCRAM: a reference-based compression tool for ion torrent sequence files. - Moustafa Shokrof; Mohamed Abouelhoda (BMC Bioinform., 2020)

MQF and buffered MQF: quotient filters for efficient storage of k-mers with their counts and metadata. - Moustafa Shokrof; C. Titus Brown; Tamer A. Mansour (BMC Bioinform., 2021)

VariantSurvival: a tool to identify genotype-treatment response. - Thomas Krannich; Marina Herrera Sarrias; Hiba Ben Aribi; Moustafa Shokrof; Alfredo Iacoangeli; Ammar Al-Chalabi; Fritz J. Sedlazeck; Ben Busby; Ahmad Al Khleifat (Frontiers Bioinform., 2023)