SinicView: A visualization environment for comparisons of multiple nucleotide sequence alignment tools. - Arthur Chun-Chieh Shih; D. T. Lee; Laurent Lin; Chin-Lin Peng; Shiang-Heng Chen; Yu-Wei Wu; Chun-Yi Wong; Meng-Yuan Chou; Tze-Chang Shiao; Mu-Fen Hsieh (BMC Bioinform., 2006)

Graphlet alignment in protein interaction networks. - Mu-Fen Hsieh; Sing-Hoi Sze (GENSiPS, 2010)

Finding Alignments of Conserved Graphlets in Protein Interaction Networks. - Mu-Fen Hsieh; Sing-Hoi Sze (J. Comput. Biol., 2014)