An Estimation of Distribution Particle Swarm Optimization Algorithm. - Mudassar Iqbal; Marco Antonio Montes de Oca (ANTS Workshop, 2006)

Codon Usage Domains over Bacterial Chromosomes. - Marc Bailly-Bechet; Antoine Danchin; Mudassar Iqbal; Matteo Marsili; Massimo Vergassola (PLoS Comput. Biol., 2006)

Protein Interaction Inference Using Particle Swarm Optimization Algorithm. - Mudassar Iqbal; Alex Alves Freitas; Colin G. Johnson (EvoBIO, 2008)

Message-passing algorithms for the prediction of protein domain interactions from protein-protein interaction data. - Mudassar Iqbal; Alex Alves Freitas; Colin G. Johnson; Massimo Vergassola (Bioinform., 2008)

Efficient inference for sparse latent variable models of transcriptional regulation. - Zhenwen Dai; Mudassar Iqbal; Neil D. Lawrence; Magnus Rattray (Bioinform., 2017)

Reconstructing promoter activity from Lux bioluminescent reporters. - Mudassar Iqbal; Neil Doherty; Anna M. L. Page; Saara N. A. Qazi; Ishan Ajmera; Peter A. Lund; Theodore Kypraios; David J. Scott; Philip J. Hill; Dov J. Stekel (PLoS Comput. Biol., 2017)

PEGS: An efficient tool for gene set enrichment within defined sets of genomic intervals. - Peter Briggs; A. Louise Hunter; Shen-hsi Yang; Andrew D. Sharrocks; Mudassar Iqbal (F1000Research, 2021)

TriTan: an efficient triple nonnegative matrix factorization method for integrative analysis of single-cell multiomics data. - Xin Ma; Lijing Lin; Qian Zhao; Mudassar Iqbal (Briefings Bioinform., 2024)

Ouroboros: cross-linking protein expression perturbations and cancer histology imaging with generative-predictive modeling. - Srijay Deshpande; Sokratia Georgaka; Michael Haley; Robert Sellers; James Minshull; Jayakrupakar Nallala; Martin Fergie; Nicholas Stone; Nasir M. Rajpoot; Syed Murtuza Baker; Mudassar Iqbal; Kevin Couper; et al. (Bioinform., 2024)

Female autism categorization using CNN based NeuroNet57 and ant colony optimization. - Adnan Ashraf; Qingjie Zhao; Waqas Haider Khan Bangyal; Mudassar Raza; Mudassar Iqbal (Comput. Biol. Medicine, 2025)