Comparison of feature selection methods in text classification on highly skewed datasets. - Muhammad Nabeel Asim; Muhammad Wasim; Muhammad Sajid Ali; Abdur Rehman (INTELLECT, 2017)

Improved biomedical term selection in pseudo relevance feedback. - Muhammad Nabeel Asim; Muhammad Wasim; Muhammad Usman Ghani Khan; Waqar Mahmood (Database J. Biol. Databases Curation, 2018)

A survey of ontology learning techniques and applications. - Muhammad Nabeel Asim; Muhammad Wasim; Muhammad Usman Ghani Khan; Waqar Mahmood; Hafiza Mahnoor Abbasi (Database J. Biol. Databases Curation, 2018)

Selection of the most relevant terms based on a max-min ratio metric for text classification. - Abdur Rehman; Kashif Javed; Haroon A. Babri; Muhammad Nabeel Asim (Expert Syst. Appl., 2018)

A Robust Hybrid Approach for Textual Document Classification. - Muhammad Nabeel Asim; Muhammad Usman Ghani Khan; Muhammad Imran Malik; Andreas Dengel 001; Sheraz Ahmed (ICDAR, 2019)

Two Stream Deep Network for Document Image Classification. - Muhammad Nabeel Asim; Muhammad Usman Ghani Khan; Muhammad Imran Malik; Khizar Razzaque; Andreas Dengel 001; Sheraz Ahmed (ICDAR, 2019)

The Use of Ontology in Retrieval: A Study on Textual, Multilingual, and Multimedia Retrieval. - Muhammad Nabeel Asim; Muhammad Wasim; Muhammad Usman Ghani Khan; Nasir Mahmood; Waqar Mahmood (IEEE Access, 2019)

Multi-Label Question Classification for Factoid and List Type Questions in Biomedical Question Answering. - Muhammad Wasim; Waqar Mahmood; Muhammad Nabeel Asim; Muhammad Usman Ghani Khan (IEEE Access, 2019)

A Robust and Precise ConvNet for small non-coding RNA classification (RPC-snRC). - Muhammad Nabeel Asim; Muhammad Imran Malik; Andreas Dengel 001; Sheraz Ahmed (CoRR, 2019)

Multi-label biomedical question classification for lexical answer type prediction. - Muhammad Wasim; Muhammad Nabeel Asim; Muhammad Usman Ghani Khan; Waqar Mahmood (J. Biomed. Informatics, 2019)

Lexical paraphrasing and pseudo relevance feedback for biomedical document retrieval. - Muhammad Wasim; Muhammad Nabeel Asim; Muhammad Usman Ghani 001; Zahoor-Ur Rehman; Seungmin Rho; Irfan Mehmood (Multim. Tools Appl., 2019)

Enhancer-DSNet: A Supervisedly Prepared Enriched Sequence Representation for the Identification of Enhancers and Their Strength. - Muhammad Nabeel Asim; Muhammad Ali Ibrahim; Muhammad Imran Malik; Andreas Dengel 001; Sheraz Ahmed (ICONIP (3), 2020)

K-mer Neural Embedding Performance Analysis Using Amino Acid Codons. - Muhammad Nabeel Asim; Muhammad Imran Malik; Andreas Dengel 001; Sheraz Ahmed (IJCNN, 2020)

A Precisely Xtreme-Multi Channel Hybrid Approach for Roman Urdu Sentiment Analysis. - Faiza Mehmood; Muhammad Usman Ghani 001; Muhammad Ali Ibrahim; Rehab Shahzadi; Waqar Mahmood; Muhammad Nabeel Asim (IEEE Access, 2020)

Benchmark Performance of Machine And Deep Learning Based Methodologies for Urdu Text Document Classification. - Muhammad Nabeel Asim; Muhammad Usman Ghani 001; Muhammad Ali Ibrahim; Sheraz Ahmed; Waqar Mahmood; Andreas Dengel 001 (CoRR, 2020)

A Precisely Xtreme-Multi Channel Hybrid Approach For Roman Urdu Sentiment Analysis. - Faiza Memood; Muhammad Usman Ghani 001; Muhammad Ali Ibrahim; Rehab Shehzadi; Muhammad Nabeel Asim (CoRR, 2020)

ChrSLoc-Net: Machine Learning-Based Prediction of Channelrhodopsins Proteins within Plasma Membrane. - Muhammad Nabeel Asim; Muhammad Ali Ibrahim; Muhammad Imran Malik; Andreas Dengel 001; Sheraz Ahmed (BHI, 2021)

L2S-MirLoc: A Lightweight Two Stage MiRNA Sub-Cellular Localization Prediction Framework. - Muhammad Nabeel Asim; Muhammad Ali Ibrahim; Christoph Zehe; Olivier Cloarec; Rickard Sjögren; Johan Trygg; Andreas Dengel 001; Sheraz Ahmed (IJCNN, 2021)

A Robust and Precise ConvNet for Small Non-Coding RNA Classification (RPC-snRC). - Muhammad Nabeel Asim; Muhammad Imran Malik; Christoph Zehe; Johan Trygg; Andreas Dengel 001; Sheraz Ahmed (IEEE Access, 2021)

GHS-NET a generic hybridized shallow neural network for multi-label biomedical text classification. - Muhammad Ali Ibrahim; Muhammad Usman Ghani Khan; Faiza Mehmood; Muhammad Nabeel Asim; Waqar Mahmood (J. Biomed. Informatics, 2021)

A new feature selection metric for text classification: eliminating the need for a separate pruning stage. - Muhammad Nabeel Asim; Kashif Javed; Abdur Rehman; Haroon A. Babri (Int. J. Mach. Learn. Cybern., 2021)

Correction to: Benchmarking performance of machine and deep learning-based methodologies for Urdu text document classification. - Muhammad Nabeel Asim; Muhammad Usman Ghani 001; Muhammad Ali Ibrahim; Waqar Mahmood; Andreas Dengel 001; Sheraz Ahmed (Neural Comput. Appl., 2021)

Benchmarking performance of machine and deep learning-based methodologies for Urdu text document classification. - Muhammad Nabeel Asim; Muhammad Usman Ghani Khan; Muhammad Ali Ibrahim; Waqar Mahmood; Andreas Dengel 001; Sheraz Ahmed (Neural Comput. Appl., 2021)

CircNet: an encoder-decoder-based convolution neural network (CNN) for circular RNA identification. - Marco Stricker; Muhammad Nabeel Asim; Andreas Dengel 001; Sheraz Ahmed (Neural Comput. Appl., 2022)

Deep Learning Architectures for the Prediction of YY1-Mediated Chromatin Loops. - Ahtisham Fazeel Abbasi; Muhammad Nabeel Asim; Johan Trygg; Andreas Dengel 001; Sheraz Ahmed (ISBRA, 2023)

An Efficient Automated Machine Learning Framework for Genomics and Proteomics Sequence Analysis. - Muhammad Nabeel Asim (2023)

DNA-MP: a generalized DNA modifications predictor for multiple species based on powerful sequence encoding method. - Muhammad Nabeel Asim; Muhammad Ali Ibrahim; Ahtisham Fazeel; Andreas Dengel 001; Sheraz Ahmed (Briefings Bioinform., 2023)

FNReq-Net: A hybrid computational framework for functional and non-functional requirements classification. - Summra Saleem; Muhammad Nabeel Asim; Ludger van Elst; Andreas Dengel 001 (J. King Saud Univ. Comput. Inf. Sci., 2023)

EnML: Multi-label Ensemble Learning for Urdu Text Classification. - Faiza Mehmood; Rehab Shahzadi; Hina Ghafoor; Muhammad Nabeel Asim; Muhammad Usman Ghani 001; Waqar Mahmood; Andreas Dengel 001 (ACM Trans. Asian Low Resour. Lang. Inf. Process., 2023)

A Unique Training Strategy to Enhance Language Models Capabilities for Health Mention Detection from Social Media Content. - Pervaiz Iqbal Khan; Muhammad Nabeel Asim; Andreas Dengel 001; Sheraz Ahmed (ICAART (3), 2024)

RPRP-SAP: A Robust and Precise ResNet Predictor for Steering Angle Prediction of Autonomous Vehicles. - Summra Saleem; Muhammad Nabeel Asim; Ludger van Elst; Peter Schichtel; Andreas Dengel 001 (IEEE Access, 2024)

CAPTURE: Comprehensive anti-cancer peptide predictor with a unique amino acid sequence encoder. - Hina Ghafoor; Muhammad Nabeel Asim; Muhammad Ali Ibrahim; Sheraz Ahmed; Andreas Dengel 001 (Comput. Biol. Medicine, 2024)

Quantitative knowledge retrieval from large language models. - David Antony Selby; Kai Spriestersbach; Yuichiro Iwashita; Dennis Bappert; Archana Warrier; Sumantrak Mukherjee; Muhammad Nabeel Asim; Koichi Kise; Sebastian J. Vollmer (CoRR, 2024)

Generative Language Models Potential for Requirement Engineering Applications: Insights into Current Strengths and Limitations. - Summra Saleem; Muhammad Nabeel Asim; Ludger van Elst; Andreas Dengel 001 (CoRR, 2024)

Survival prediction landscape: an in-depth systematic literature review on activities, methods, tools, diseases, and databases. - Ahtisham Fazeel Abbasi; Muhammad Nabeel Asim; Sheraz Ahmed; Sebastian J. Vollmer; Andreas Dengel 001 (Frontiers Artif. Intell., 2024)

MLR-predictor: a versatile and efficient computational framework for multi-label requirements classification. - Summra Saleem; Muhammad Nabeel Asim; Ludger van Elst; Markus Junker 002; Andreas Dengel 001 (Frontiers Artif. Intell., 2024)

Passion-Net: a robust precise and explainable predictor for hate speech detection in Roman Urdu text. - Faiza Mehmood; Hina Ghafoor; Muhammad Nabeel Asim; Muhammad Usman Ghani 001; Waqar Mahmood; Andreas Dengel 001 (Neural Comput. Appl., 2024)

Fake News Detection Landscape: Datasets, Data Modalities, AI Approaches, Their Challenges, and Future Perspectives. - Fiza Gulzar Hussain; Muhammad Wasim; Seemab Hameed; Abdur Rehman; Muhammad Nabeel Asim; Andreas Dengel 001 (IEEE Access, 2025)

Protein Sequence Analysis landscape: A Systematic Review of Task Types, Databases, Datasets, Word Embeddings Methods, and Language Models. - Muhammad Nabeel Asim; Tayyaba Asif; Faiza Hassan; Andreas Dengel 001 (Database J. Biol. Databases Curation, 2025)

Peptide classification landscape: An in-depth systematic literature review on peptide types, databases, datasets, predictors architectures and performance. - Muhammad Nabeel Asim; Tayyaba Asif; Faiza Mehmood; Andreas Dengel 001 (Comput. Biol. Medicine, 2025)

PassionNet: An innovative framework for duplicate and conflicting requirements identification. - Summra Saleem; Muhammad Nabeel Asim; Andreas Dengel 001 (Expert Syst. Appl., 2025)

RPCP-PURI: A robust and precise computational predictor for Phishing Uniform Resource Identification. - Tayyaba Asif; Faiza Mehmood; Syed Ahmed Mazhar Gillani; Muhammad Nabeel Asim; Muhammad Usman Ghani 001; Waqar Mahmood; Andreas Dengel 001 (J. Inf. Secur. Appl., 2025)

AI-Driven Diabetic Retinopathy Diagnosis Enhancement through Image Processing and Salp Swarm Algorithm-Optimized Ensemble Network. - Saif Ur Rehman Khan 002; Muhammad Nabeel Asim; Sebastian J. Vollmer; Andreas Dengel 001 (CoRR, 2025)

Robust & Precise Knowledge Distillation-based Novel Context-Aware Predictor for Disease Detection in Brain and Gastrointestinal. - Saif Ur Rehman Khan 002; Muhammad Nabeel Asim; Sebastian J. Vollmer; Andreas Dengel 001 (CoRR, 2025)

Enhanced Urdu Intent Detection with Large Language Models and Prototype-Informed Predictive Pipelines. - Faiza Hassan; Summra Saleem; Kashif Javed; Muhammad Nabeel Asim; Abdur Rehman; Andreas Dengel 001 (CoRR, 2025)

The Evolution of Natural Language Processing: How Prompt Optimization and Language Models are Shaping the Future. - Summra Saleem; Muhammad Nabeel Asim; Shaista Zulfiqar; Andreas Dengel 001 (CoRR, 2025)

FOLC-Net: A Federated-Optimized Lightweight Architecture for Enhanced MRI Disease Diagnosis across Axial, Coronal, and Sagittal Views. - Saif Ur Rehman Khan 002; Muhammad Nabeel Asim; Sebastian J. Vollmer; Andreas Dengel 001 (CoRR, 2025)