ppsPCP: a plant presence/absence variants scanner and pan-genome construction pipeline. - Muhammad Tahir Ul Qamar; Xitong Zhu; Feng Xing; Ling-Ling Chen (Bioinform., 2019)

Pan-vaccinomics approach towards a universal vaccine candidate against WHO priority pathogens to address growing global antibiotic resistance. - Saba Ismail; Farah Shahid; Abbas Khan; Sadia Bhatti; Sajjad Ahmad; Anam Naz; Ahmad Almatroudi; Muhammad Tahir Ul Qamar (Comput. Biol. Medicine, 2021)

Designing multi-epitope vaccine against Staphylococcus aureus by employing subtractive proteomics, reverse vaccinology and immuno-informatics approaches. - Muhammad Tahir Ul Qamar; Sajjad Ahmad; Israr Fatima; Faisal Ahmad; Farah Shahid; Anam Naz; Sumra Wajid Abbasi; Abbas Khan; Muhammad Usman Mirza; Usman Ali Ashfaq; Ling-Ling Chen (Comput. Biol. Medicine, 2021)

Structural probing of HapR to identify potent phytochemicals to control Vibrio cholera through integrated computational approaches. - Muhammad Tahir Ul Qamar; Sajjad Ahmad; Abbas Khan; Muhammad Usman Mirza; Sarfraz Ahmad; Asma Abro; Ling-Ling Chen; Ahmad Almatroudi; Dong-Qing Wei (Comput. Biol. Medicine, 2021)

Designing of a multi-epitopes-based peptide vaccine against rift valley fever virus and its validation through integrated computational approaches. - Israr Fatima; Sajjad Ahmad; Sumra Wajid Abbasi; Usman Ali Ashfaq; Farah Shahid; Muhammad Tahir Ul Qamar; Abdur Rehman; Khaled S. Allemailem (Comput. Biol. Medicine, 2022)

Machine learning for synergistic network pharmacology: a comprehensive overview. - Fatima Noor; Muhammad Asif; Usman Ali Ashfaq; Muhammad Qasim; Muhammad Tahir Ul Qamar (Briefings Bioinform., 2023)

Advanced network pharmacology study reveals multi-pathway and multi-gene regulatory molecular mechanism of Bacopa monnieri in liver cancer based on data mining, molecular modeling, and microarray data analysis. - Muhammad Sadaqat; Muhammad Qasim; Muhammad Tahir Ul Qamar; Muhammad Shareef Masoud; Usman Ali Ashfaq; Fatima Noor; Kinza Fatima; Khaled S. Allemailem; Faris Alrumaihi; Ahmad Almatroudi (Comput. Biol. Medicine, 2023)